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PDBsum entry 7faq

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protein ligands metals links
Hydrolase/inhibitor PDB id
7faq

 

 

 

 

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Contents
Protein chain
287 a.a.
Ligands
SO4-2OI
Metals
_ZN
_MG
Waters ×72
PDB id:
7faq
Name: Hydrolase/inhibitor
Title: Crystal structure of pde5a in complex with inhibitor l1
Structure: Cgmp-specific 3',5'-cyclic phosphodiesterase. Chain: a. Synonym: cgmp-binding cgmp-specific phosphodiesterase,cgb-pde. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: pde5a, pde5. Expressed in: escherichia coli bl21. Expression_system_taxid: 511693.
Resolution:
2.20Å     R-factor:   0.228     R-free:   0.272
Authors: D.Wu,Y.Y.Huang,H.B.Luo
Key ref: D.Wu et al. (2022). Free energy perturbation (fep)-Guided scaffold hoppin. Acta pharm sin b, 12, 1351. PubMed id: 35530128
Date:
07-Jul-21     Release date:   18-May-22    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
O76074  (PDE5A_HUMAN) -  cGMP-specific 3',5'-cyclic phosphodiesterase from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
875 a.a.
287 a.a.
Key:    PfamA domain  Secondary structure

 Enzyme reactions 
   Enzyme class: E.C.3.1.4.35  - 3',5'-cyclic-GMP phosphodiesterase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: 3',5'-cyclic GMP + H2O = GMP + H+
3',5'-cyclic GMP
+ H2O
= GMP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 

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