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PDBsum entry 7cli

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protein dna_rna Protein-protein interface(s) links
DNA binding protein PDB id
7cli

 

 

 

 

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Contents
Protein chains
292 a.a.
DNA/RNA
Waters ×12
PDB id:
7cli
Name: DNA binding protein
Title: Structure of nf-kb p52 homodimer bound to p-selectin kb DNA fragment
Structure: Nuclear factor nf-kappa-b p52 subunit. Chain: a, b. Engineered: yes. DNA (5'- d( Cp Ap Ap Gp Gp Gp Gp Tp Cp Ap Cp Cp Cp Cp Cp Tp Tp C)-3'). Chain: c. Engineered: yes. DNA (5'- d( Gp Ap Ap Gp Gp Gp Gp Gp Tp Gp Ap Cp Cp Cp Cp Tp Tp G)-3').
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: nfkb2, lyt10. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008. Expression_system_variant: rosetta. Synthetic: yes. Organism_taxid: 9606
Resolution:
3.00Å     R-factor:   0.236     R-free:   0.275
Authors: V.A.Meshcheryakov,V.Y.-F.Wang
Key ref: V.A.Meshcheryakov and v.y.-f.wang Structure of nf-Kb p52 homodimer bound to p-Selectin fragment. To be published, . PubMed id: 36779700
Date:
21-Jul-20     Release date:   21-Jul-21    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q00653  (NFKB2_HUMAN) -  Nuclear factor NF-kappa-B p100 subunit from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
900 a.a.
292 a.a.
Key:    PfamA domain  Secondary structure

DNA/RNA chains
  C-A-A-G-G-G-G-T-C-A-C-C-C-C-C-T-T 17 bases
  G-A-A-G-G-G-G-G-T-G-A-C-C-C-C-T-T-G 18 bases

 

 

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