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PDBsum entry 7cgd

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protein metals Protein-protein interface(s) links
Metal binding protein PDB id
7cgd

 

 

 

 

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Contents
Protein chains
300 a.a.
Metals
_AG ×27
Waters ×49
PDB id:
7cgd
Name: Metal binding protein
Title: Silver-bound e.Coli malate dehydrogenase
Structure: Malate dehydrogenase. Chain: a, b, c, d. Engineered: yes. Mutation: yes
Source: Escherichia coli k-12. Organism_taxid: 83333. Strain: k-12. Gene: mdh. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Resolution:
2.06Å     R-factor:   0.215     R-free:   0.247
Authors: H.Wang,M.Wang,H.Sun
Key ref: H.Wang et al. Atomic differentiation of silver binding preference i protein targets: escherichia coli malate dehydrogenas paradigm. Chem sci, . PubMed id: 34123202
Date:
01-Jul-20     Release date:   23-Sep-20    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
P61889  (MDH_ECOLI) -  Malate dehydrogenase from Escherichia coli (strain K12)
Seq:
Struc:
312 a.a.
300 a.a.*
Key:    PfamA domain  Secondary structure
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class: E.C.1.1.1.37  - malate dehydrogenase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

      Pathway:
Citric acid cycle
      Reaction: (S)-malate + NAD+ = oxaloacetate + NADH + H+
(S)-malate
+ NAD(+)
= oxaloacetate
+ NADH
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 

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