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PDBsum entry 7acf

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protein ligands metals Protein-protein interface(s) links
Signaling protein PDB id
7acf

 

 

 

 

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JSmol PyMol  
Contents
Protein chains
169 a.a.
Ligands
GCP ×4
R6W ×2
Metals
_MG ×4
Waters ×445
PDB id:
7acf
Name: Signaling protein
Title: Crystal structure of crystal form 2 of an active kras g12d (gppcp) dimer in complex with bi-5747
Structure: Gtpase kras. Chain: a, b, c, d. Synonym: k-ras 2,ki-ras,c-k-ras,c-ki-ras. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: kras, kras2, rask2. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
1.91Å     R-factor:   0.187     R-free:   0.198
Authors: D.Kessler
Key ref: D.Kessler et al. (2020). Reply to tran et al.: Dimeric kras protein-Protein interaction stabilizers.. Proc natl acad sci, 117, 3365.
Date:
10-Sep-20     Release date:   18-Nov-20    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
P01116  (RASK_HUMAN) -  GTPase KRas from Homo sapiens
Seq:
Struc:
189 a.a.
169 a.a.*
Key:    PfamA domain  Secondary structure
* PDB and UniProt seqs differ at 7 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class: E.C.3.6.5.2  - small monomeric GTPase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: GTP + H2O = GDP + phosphate + H+
GTP
+ H2O
=
GDP
Bound ligand (Het Group name = GCP)
matches with 81.82% similarity
+ phosphate
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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