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PDBsum entry 6yf1

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protein ligands links
Isomerase PDB id
6yf1

 

 

 

 

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JSmol PyMol  
Contents
Protein chain
107 a.a.
Ligands
OP8
Waters ×170
PDB id:
6yf1
Name: Isomerase
Title: Fkbp12 in complex with the bmp potentiator compound 8 at 1.12a resolution
Structure: Peptidyl-prolyl cis-trans isomerase fkbp1a. Chain: a. Synonym: ppiase fkbp1a,12 kda fk506-binding protein,fkbp-12, calstabin-1,fk506-binding protein 1a,fkbp-1a,immunophilin fkbp12, rotamase. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: fkbp1a, fkbp1, fkbp12. Expressed in: escherichia coli bl21. Expression_system_taxid: 511693.
Resolution:
1.12Å     R-factor:   0.156     R-free:   0.163
Authors: J.Kallen
Key ref: m.h.larraufie et al. (2021). Phenotypic screen identifies calcineurin-sparing FK506 analogs as BMP potentiators for treatment of acute kidney injury. Cell Chem Biol, 0, . PubMed id: 33894161
Date:
25-Mar-20     Release date:   10-Mar-21    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
P62942  (FKB1A_HUMAN) -  Peptidyl-prolyl cis-trans isomerase FKBP1A from Homo sapiens
Seq:
Struc:
108 a.a.
107 a.a.
Key:    PfamA domain  Secondary structure

 Enzyme reactions 
   Enzyme class: E.C.5.2.1.8  - peptidylprolyl isomerase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: [protein]-peptidylproline (omega=180) = [protein]-peptidylproline (omega=0)
Peptidylproline (omega=180)
= peptidylproline (omega=0)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Added reference    
 
 
Cell Chem Biol 0: (2021)
PubMed id: 33894161  
 
 
Phenotypic screen identifies calcineurin-sparing FK506 analogs as BMP potentiators for treatment of acute kidney injury.
m.h.larraufie, x.gao, x.xia, p.j.devine, d.liu, a.harsch, j.kallen, n.savage, j.ding, k.tan, m.mihalic, p.krastel, g.michaud, m.salcius, a.izaac, j.gao, f.harbinski, s.roggos.canham, s.bushell, e.altinoglu, p.lustenberger, e.willic.fryer, f.cong, l.klickstein, j.tallarico, r.jain, d.m.ros.wang.
 
  ABSTRACT  
 
No abstract given.

 

 

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