PDBsum entry 6xgo

DNA

PDB id: 6xgo

Contents

DNA/RNA

Metals

_MG ×2

PDB id:

6xgo

Name:

DNA

Title:

Self-assembly of a 3d DNA crystal lattice (4x5 junction version) containing the j34 immobile holliday junction

Structure:

DNA (5'-d( Gp Ap Gp Cp Ap Gp Ap Cp Ap Ap G)-3'). Chain: a. Engineered: yes. DNA (5'-d(p Ap Cp Tp Cp Cp Ap Cp Tp Cp A)-3'). Chain: b. Engineered: yes. DNA (5'-d(p Cp Tp Ap Gp T)-3'). Chain: c. Engineered: yes.

Source:

Synthetic: yes. Synthetic construct. Organism_taxid: 32630. Organism_taxid: 32630

Resolution:

3.00Å R-factor: 0.212 R-free: 0.234

Authors:

C.R.Simmons,T.Macculloch,N.Stephanopoulos,H.Yan

Key ref:

C.R.Simmons et al. (2022). The influence of holliday junction sequence and dynam DNA crystal self-Assembly.. Nat commun, 13, 3112. PubMed id: 35662248

Date:

17-Jun-20 Release date: 14-Jul-21

DNA/RNA chains

G-A-G-C-A-G-A-C-A-A-G 11 bases

A-C-T-C-C-A-C-T-C-A 10 bases

C-T-A-G-T 5 bases

T-C-T-G-A-G-T-G-G-T-G-T-C-T-G-C 16 bases