PDBsum entry 6xg0

DNA

PDB id: 6xg0

Contents

DNA/RNA

Ligands

CAC ×2

PDB id:

6xg0

Name:

DNA

Title:

Self-assembly of a 3d DNA crystal lattice (4x5 junction version) containing the j31 immobile holliday junction

Structure:

DNA (5'-d( Gp Ap Gp Cp Ap Gp Ap Cp Cp Ap G)-3'). Chain: a. Engineered: yes. DNA (5'-d(p Ap Cp Gp Cp Cp Ap Cp Tp Cp A)-3'). Chain: b. Engineered: yes. DNA (5'-d(p Cp Tp Cp Gp T)-3'). Chain: c. Engineered: yes.

Source:

Synthetic: yes. Synthetic construct. Organism_taxid: 32630. Organism_taxid: 32630

Resolution:

3.18Å R-factor: 0.240 R-free: 0.261

Authors:

C.R.Simmons,T.Macculloch,N.Stephanopoulos,H.Yan

Key ref:

C.R.Simmons et al. (2022). The influence of holliday junction sequence and dynam DNA crystal self-Assembly.. Nat commun, 13, 3112. PubMed id: 35662248

Date:

16-Jun-20 Release date: 14-Jul-21

DNA/RNA chains

G-A-G-C-A-G-A-C-C-A-G 11 bases

A-C-G-C-C-A-C-T-C-A 10 bases

C-T-C-G-T 5 bases

T-C-T-G-A-G-T-G-G-G-G-T-C-T-G-C 16 bases