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PDBsum entry 6tfn
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PDB id:
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Lyase
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Title:
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Linalool dehydratase isomerase in complex with myrcene
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Structure:
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Linalool dehydratase-isomerase protein ldi. Chain: a, b, c, d, e, f, g, h, i, j. Engineered: yes
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Source:
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Castellaniella defragrans 65phen. Organism_taxid: 1437824. Gene: bn940_14136. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008
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Resolution:
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2.18Å
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R-factor:
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0.190
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R-free:
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0.209
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Authors:
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A.Cuetos,E.Zukic,H.R.Danesh-Azari,G.Grogan
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Key ref:
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A.Cuetos
et al.
Mutational analysis of linalool dehydratase isomerase suggests that alcohol and alkene transformations are catalyzed using noncovalent mechanisms.
Acs catalysis,
.
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Date:
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14-Nov-19
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Release date:
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07-Oct-20
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PROCHECK
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Headers
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References
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E1XUJ2
(LDI_CASD6) -
Linalool dehydratase/isomerase from Castellaniella defragrans (strain DSM 12143 / CCUG 39792 / 65Phen)
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Seq:
Struc:
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397 a.a.
362 a.a.
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Key: |
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PfamA domain |
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Secondary structure |
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Enzyme class 1:
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E.C.4.2.1.127
- linalool dehydratase.
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Reaction:
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(S)-linalool = beta-myrcene + H2O
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(S)-linalool
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=
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beta-myrcene
Bound ligand (Het Group name = )
corresponds exactly
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+
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H2O
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Enzyme class 2:
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E.C.5.4.4.4
- geraniol isomerase.
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Reaction:
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(2E)-geraniol = (S)-linalool
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Geraniol
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=
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linalool
Bound ligand (Het Group name = )
matches with 90.91% similarity
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Note, where more than one E.C. class is given (as above), each may
correspond to a different protein domain or, in the case of polyprotein
precursors, to a different mature protein.
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Molecule diagrams generated from .mol files obtained from the
KEGG ftp site
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Links
