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PDBsum entry 6t3l

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protein ligands Protein-protein interface(s) links
Transferase PDB id
6t3l

 

 

 

 

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JSmol PyMol  
Contents
Protein chains
315 a.a.
Ligands
LBV ×2
Waters ×145
PDB id:
6t3l
Name: Transferase
Title: Pas-gaf fragment from deinococcus radiodurans phytochrome in dark state
Structure: Bacteriophytochrome. Chain: b, a. Synonym: phytochrome-like protein. Engineered: yes
Source: Deinococcus radiodurans. Organism_taxid: 1299. Strain: atcc 13939 / dsm 20539 / jcm 16871 / lmg 4051 / nbrc 15346 / ncimb 9279 / r1 / vkm b-1422. Atcc: 13939. Gene: bphp, dr_a0050. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Resolution:
2.07Å     R-factor:   0.163     R-free:   0.192
Authors: E.Claesson,H.Takala,W.Yuan Wahlgren,S.Pandey,M.Schmidt,S.Westenhoff
Key ref: E.Claesson et al. (2020). The primary structural photoresponse of phytochrome p captured by a femtosecond X-Ray laser.. Elife, 9, . PubMed id: 32228856
Date:
11-Oct-19     Release date:   08-Apr-20    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q9RZA4  (BPHY_DEIRA) -  Bacteriophytochrome from Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)
Seq:
Struc:
 
Seq:
Struc:
755 a.a.
315 a.a.*
Key:    PfamA domain  Secondary structure
* PDB and UniProt seqs differ at 3 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class: E.C.2.7.13.3  - histidine kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: ATP + protein L-histidine = ADP + protein N-phospho-L-histidine
ATP
+ protein L-histidine
= ADP
+ protein N-phospho-L-histidine
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 

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