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PDBsum entry 6pp2

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protein ligands metals Protein-protein interface(s) links
Oxidoreductase/inhibitor PDB id
6pp2

 

 

 

 

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Contents
Protein chains
404 a.a.
Ligands
HEM ×4
H4B ×4
OUM ×4
BTB ×11
GOL ×2
Metals
_CL ×4
_GD ×2
_ZN ×2
Waters ×767
PDB id:
6pp2
Name: Oxidoreductase/inhibitor
Title: Structure of human endothelial nitric oxide synthase heme domain in complex with 4-((4-(2-amino-4-methylquinolin-7-yl)-2-(aminomethyl) phenoxy)methyl)benzonitrile
Structure: Nitric oxide synthase, endothelial. Chain: a, b, c, d. Synonym: constitutive nos,cnos,ec-nos,endothelial nos,enos,nos type iii,nosiii. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Cell: endothelial. Gene: nos3. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Resolution:
2.02Å     R-factor:   0.201     R-free:   0.246
Authors: G.Chreifi,H.Li,T.L.Poulos
Key ref: M.A.Cinelli et al. (2020). First Contact: 7-Phenyl-2-Aminoquinolines, Potent and Selective Neuronal Nitric Oxide Synthase Inhibitors That Target an Isoform-Specific Aspartate. J Med Chem, 63, 4528-4554. PubMed id: 32302123 DOI: 10.1021/acs.jmedchem.9b01573
Date:
05-Jul-19     Release date:   29-Apr-20    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
P29474  (NOS3_HUMAN) -  Nitric oxide synthase 3 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1203 a.a.
404 a.a.*
Key:    PfamA domain  Secondary structure
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class: E.C.1.14.13.39  - nitric-oxide synthase (NADPH).
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: 2 L-arginine + 3 NADPH + 4 O2 + H+ = 2 L-citrulline + 2 nitric oxide + 3 NADP+ + 4 H2O
2 × L-arginine
+ 3 × NADPH
+ 4 × O2
+ H(+)
= 2 × L-citrulline
+ 2 × nitric oxide
+ 3 × NADP(+)
+ 4 × H2O
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    reference    
 
 
DOI no: 10.1021/acs.jmedchem.9b01573 J Med Chem 63:4528-4554 (2020)
PubMed id: 32302123  
 
 
First Contact: 7-Phenyl-2-Aminoquinolines, Potent and Selective Neuronal Nitric Oxide Synthase Inhibitors That Target an Isoform-Specific Aspartate.
M.A.Cinelli, C.T.Reidl, H.Li, G.Chreifi, T.L.Poulos, R.B.Silverman.
 
  ABSTRACT  
 
Inhibition of neuronal nitric oxide synthase (nNOS), an enzyme implicated in neurodegenerative disorders, is an attractive strategy for treating or preventing these diseases. We previously developed several classes of 2-aminoquinoline-based nNOS inhibitors, but these compounds had drawbacks including off-target promiscuity, low activity against human nNOS, and only modest selectivity for nNOS over related enzymes. In this study, we synthesized new nNOS inhibitors based on 7-phenyl-2-aminoquinoline and assayed them against rat and human nNOS, human eNOS, and murine and (in some cases) human iNOS. Compounds with a meta-relationship between the aminoquinoline and a positively charged tail moiety were potent and had up to nearly 900-fold selectivity for human nNOS over human eNOS. X-ray crystallography indicates that the amino groups of some compounds occupy a water-filled pocket surrounding an nNOS-specific aspartate residue (absent in eNOS). This interaction was confirmed by mutagenesis studies, making 7-phenyl-2-aminoquinolines the first aminoquinolines to interact with this residue.
 

 

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