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PDBsum entry 6o1v

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protein ligands metals Protein-protein interface(s) links
Hydrolase PDB id
6o1v

 

 

 

 

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Contents
Protein chains
1179 a.a.
17 a.a.
Ligands
LJP
ATP ×2
POV ×5
CLR
Metals
_MG ×2
PDB id:
6o1v
Name: Hydrolase
Title: Complex of human cystic fibrosis transmembrane conductance regulator (cftr) and glpg1837
Structure: Cystic fibrosis transmembrane conductance regulator. Chain: a. Synonym: cftr,atp-binding cassette sub-family c member 7,channel conductance-controlling atpase,camp-dependent chloride channel. Engineered: yes. Unknown peptide. Chain: b. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: cftr, abcc7. Expressed in: homo sapiens. Expression_system_taxid: 9606. Expression_system_taxid: 9606
Authors: Z.Zhang,F.Liu,J.Chen,A.Levit,B.Shoichet
Key ref: F.Liu et al. (2019). Structural identification of a hotspot on CFTR for potentiation. Science, 364, 1184-1188. PubMed id: 31221859 DOI: 10.1126/science.aaw7611
Date:
21-Feb-19     Release date:   26-Jun-19    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P13569  (CFTR_HUMAN) -  Cystic fibrosis transmembrane conductance regulator from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1480 a.a.
1179 a.a.*
Protein chain
No UniProt id for this chain
Struc: 17 a.a.
Key:    PfamA domain  Secondary structure
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class: Chain A: E.C.5.6.1.6  - channel-conductance-controlling ATPase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: ATP + H2O + closed Cl- channel = ADP + phosphate + open Cl- channel
ATP
Bound ligand (Het Group name = ATP)
corresponds exactly
+ H2O
+ closed Cl(-) channel
= ADP
+ phosphate
+ open Cl(-) channel
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    reference    
 
 
DOI no: 10.1126/science.aaw7611 Science 364:1184-1188 (2019)
PubMed id: 31221859  
 
 
Structural identification of a hotspot on CFTR for potentiation.
F.Liu, Z.Zhang, A.Levit, J.Levring, K.K.Touhara, B.K.Shoichet, J.Chen.
 
  ABSTRACT  
 
Cystic fibrosis is a fatal disease caused by mutations in the cystic fibrosis transmembrane conductance regulator (CFTR). Two main categories of drugs are being developed: correctors that improve folding of CFTR and potentiators that recover the function of CFTR. Here, we report two cryo-electron microscopy structures of human CFTR in complex with potentiators: one with the U.S. Food and Drug Administration (FDA)-approved drug ivacaftor at 3.3-angstrom resolution and the other with an investigational drug, GLPG1837, at 3.2-angstrom resolution. These two drugs, although chemically dissimilar, bind to the same site within the transmembrane region. Mutagenesis suggests that in both cases, hydrogen bonds provided by the protein are important for drug recognition. The molecular details of how ivacaftor and GLPG1837 interact with CFTR may facilitate structure-based optimization of therapeutic compounds.
 

 

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