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PDBsum entry 6kye

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protein ligands Protein-protein interface(s) links
Oxygen transport PDB id
6kye

 

 

 

 

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Contents
Protein chains
(+ 0 more) 140 a.a.
(+ 0 more) 146 a.a.
Ligands
HEM-CMO ×12
Waters ×139
PDB id:
6kye
Name: Oxygen transport
Title: The crystal structure of recombinant human adult hemoglobin
Structure: Hemoglobin subunit alpha. Chain: a, c, e, g, i, k. Synonym: alpha-globin,hemoglobin alpha chain. Engineered: yes. Hemoglobin subunit beta. Chain: b, d, f, h, j, l. Synonym: beta-globin,hemoglobin beta chain. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: hba1, hba2. Expressed in: komagataella phaffii gs115. Expression_system_taxid: 644223. Gene: hbb.
Resolution:
2.28Å     R-factor:   0.228     R-free:   0.268
Authors: K.Kihira,R.Funaki,W.Okamoto,C.Endo,Y.Morita,T.Komatsu
Key ref: R.Funaki et al. (2020). Genetically engineered haemoglobin wrapped covalently with human serum albumins as an artificial O2 carrier. J Mater Chem B, 8, 1139-1145. PubMed id: 31840728 DOI: 10.1039/c9tb02184a
Date:
18-Sep-19     Release date:   01-Jan-20    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
P69905  (HBA_HUMAN) -  Hemoglobin subunit alpha from Homo sapiens
Seq:
Struc:
142 a.a.
140 a.a.
Protein chains
Pfam   ArchSchema ?
P68871  (HBB_HUMAN) -  Hemoglobin subunit beta from Homo sapiens
Seq:
Struc:
147 a.a.
146 a.a.
Key:    PfamA domain  Secondary structure

 

 
DOI no: 10.1039/c9tb02184a J Mater Chem B 8:1139-1145 (2020)
PubMed id: 31840728  
 
 
Genetically engineered haemoglobin wrapped covalently with human serum albumins as an artificial O2 carrier.
R.Funaki, W.Okamoto, C.Endo, Y.Morita, K.Kihira, T.Komatsu.
 
  ABSTRACT  
 
We describe the synthesis and O2 affinity of genetically engineered human adult haemoglobin (rHbA) wrapped covalently with recombinant human serum albumins (rHSAs) as an artificial O2 carrier used for a completely synthetic red blood cell (RBC) substitute. Wild-type rHbA [rHbA(wt)] expressed in yeast species Pichia pastoris shows an identical amino acid sequence and three-dimensional structure to those of native HbA. It is particularly interesting that two orientations of the prosthetic haem group in rHbA(wt) were aligned by gentle heating in the natural form. Covalent wrapping of rHbA(wt) with three rHSAs conferred a core-shell structured haemoglobin-albumin cluster: rHbA(wt)-rHSA3. Three variant clusters containing an rHbA mutant core were also created: Leu-β28 → Phe, Leu-β28 → Trp, and Leu-β28 → Tyr/His-β63 → Gln. Replacement of Leu-β28 with Trp decreased the distal space in the haem pocket, thereby yielding a cluster with moderately low O2 affinity which is nearly the same as that of human RBC.
 

 

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