PDBsum entry 6c6f

Immune system

PDB id: 6c6f

Contents

Protein chains

263 a.a.

98 a.a.

Ligands

NAG-NAG-BMA-MAN-MAN-FUC

NAG ×2

ELS

Metals

_NA ×2

Waters ×255

PDB id:

6c6f

Name:

Immune system

Title:

Structure of glycolipid agsa[26,p5p] in complex with mouse cd1d

Structure:

Antigen-presenting glycoprotein cd1d1. Chain: a. Synonym: mcg3074,isoform cra_a. Engineered: yes. Beta-2-microglobulin. Chain: b. Engineered: yes

Source:

Mus musculus. Mouse. Organism_taxid: 10090. Gene: cd1d1, mcg_3074. Expressed in: spodoptera frugiperda. Expression_system_taxid: 7108. Gene: b2m.

Resolution:

1.67Å R-factor: 0.196 R-free: 0.222

Authors:

D.M.Zajonc,J.Wang

Key ref:

D.M.Zajonc and j.wang Structure-Function analysis of sphingamides. To be published, .

Date:

18-Jan-18 Release date: 30-Jan-19

Protein chain

P11609  (CD1D1_MOUSE) -  Antigen-presenting glycoprotein CD1d1 from Mus musculus

Seq: 336 a.a.

Struc: 263 a.a.

Protein chain

P01887  (B2MG_MOUSE) -  Beta-2-microglobulin from Mus musculus

Seq: 119 a.a.

Struc: 98 a.a.