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PDBsum entry 6bb0

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protein ligands Protein-protein interface(s) links
Oxidoreductase PDB id
6bb0

 

 

 

 

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Contents
Protein chains
323 a.a.
Ligands
NAD ×4
EPE ×3
SO4 ×4
D3S ×3
LAC
Waters ×721
PDB id:
6bb0
Name: Oxidoreductase
Title: Lactate dehydrogenase in complex with inhibitor (r)-3-((2- chlorophenyl)thio)-6-(3-((4-fluorophenyl)amino)phenyl)-4-hydroxy-6- (thiophen-3-yl)-5,6-dihydro-2h-pyran-2-one
Structure: L-lactate dehydrogenase a chain. Chain: a, b, c, d. Synonym: ldh-a,cell proliferation-inducing gene 19 protein,ldh muscle subunit,ldh-m,renal carcinoma antigen ny-ren-59. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: ldha, pig19. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
1.95Å     R-factor:   0.168     R-free:   0.215
Authors: M.Ultsch,C.Eigenbrot
Key ref: B.Wei et al. Structure-Guided optimization and in vivo activities hydroxylactone and hydroxylactam inhibitors of human dehydrogenase. To be published, .
Date:
16-Oct-17     Release date:   24-Oct-18    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
P00338  (LDHA_HUMAN) -  L-lactate dehydrogenase A chain from Homo sapiens
Seq:
Struc:
332 a.a.
323 a.a.
Key:    PfamA domain  Secondary structure

 Enzyme reactions 
   Enzyme class: E.C.1.1.1.27  - L-lactate dehydrogenase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: (S)-lactate + NAD+ = pyruvate + NADH + H+
(S)-lactate
Bound ligand (Het Group name = LAC)
corresponds exactly
+
NAD(+)
Bound ligand (Het Group name = NAD)
corresponds exactly
= pyruvate
+ NADH
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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