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PDBsum entry 5zzv
Go to PDB code:
Hydrolase
PDB id
5zzv
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Contents
Protein chain
193 a.a.
Ligands
EDO
Waters
×137
PDB id:
5zzv
Links
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Name:
Hydrolase
Title:
Crystal structure of peg-1500 crystallized peptidyl-tRNA hydrolase from acinetobacter baumannii at 1.5 a resolution
Structure:
Peptidyl-tRNA hydrolase. Chain: a. Synonym: pth. Engineered: yes
Source:
Acinetobacter baumannii (strain atcc 19606 / dsm 30007 / cip 70.34 / jcm 6841 / nbrc 109757 / ncimb 12457 / nctc 12156 / 81). Organism_taxid: 575584. Strain: atcc 19606 / dsm 30007 / cip 70.34 / jcm 6841 / nbrc 109757 / ncimb 12457 / nctc 12156 / 81. Atcc: 19606. Gene: pth, bit33_16330, hmpref0010_01329. Expressed in: escherichia coli bl21.
Resolution:
1.57Å
R-factor:
0.172
R-free:
0.205
Authors:
H.R.Bairagya,P.Sharma,N.Iqbal,S.Sharma,T.P.Singh
Key ref:
H.R.Bairagya et al. Crystal structure of peg-1500 crystallized peptidyl-T hydrolase from acinetobacter baumannii at 1.5 a resol.
To be published
, .
Date:
04-Jun-18
Release date:
20-Jun-18
PROCHECK
Headers
References
Protein chain
?
D0C9L6
(D0C9L6_ACIB2) - Peptidyl-tRNA hydrolase from Acinetobacter baumannii (strain ATCC 19606 / DSM 30007 / JCM 6841 / CCUG 19606 / CIP 70.34 / NBRC 109757 / NCIMB 12457 / NCTC 12156 / 81)
Seq:
Struc:
193 a.a.
193 a.a.
Key:
PfamA domain
Secondary structure
Enzyme reactions
Enzyme class:
E.C.3.1.1.29
- peptidyl-tRNA hydrolase.
[IntEnz]
[ExPASy]
[KEGG]
[BRENDA]
Reaction:
an N-acyl-L-alpha-aminoacyl-tRNA + H2O = an N-acyl-L-amino acid + a tRNA + H
+
N-acyl-L-alpha-aminoacyl-tRNA
+
H2O
=
N-acyl-L-amino acid
+
tRNA
+
H(+)
Molecule diagrams generated from .mol files obtained from the
KEGG ftp site
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