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PDBsum entry 5zg0

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protein ligands metals Protein-protein interface(s) links
Transport protein PDB id
5zg0

 

 

 

 

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Contents
Protein chains
(+ 0 more) 260 a.a.
Ligands
GLU ×6
9C3 ×3
ACT ×7
Metals
_ZN ×12
Waters ×1093
PDB id:
5zg0
Name: Transport protein
Title: Crystal structure of the glua2o lbd in complex with glutamate and compound-1
Structure: Glutamate receptor 2. Chain: a, b, c, d, e, f. Fragment: unp residues 413-527,unp residues 653-796. Synonym: glur-2,ampa-selective glutamate receptor 2,glur-b,glur-k2, glutamate receptor ionotropic,ampa 2,glua2. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: glur2, gria2, glur2. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
1.58Å     R-factor:   0.195     R-free:   0.221
Authors: S.Sogabe,S.Igaki,A.Hirokawa,Y.Zama,W.Lane,G.Snell
Key ref: A.Kunugi et al. (2019). TAK-137, an AMPA-R potentiator with little agonistic effect, has a wide therapeutic window. Neuropsychopharmacology, 44, 961-970. PubMed id: 30209408 DOI: 10.1038/s41386-018-0213-7
Date:
07-Mar-18     Release date:   16-Jan-19    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
P42262  (GRIA2_HUMAN) -  Glutamate receptor 2 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
883 a.a.
260 a.a.*
Key:    PfamA domain  Secondary structure
* PDB and UniProt seqs differ at 2 residue positions (black crosses)

 

 
DOI no: 10.1038/s41386-018-0213-7 Neuropsychopharmacology 44:961-970 (2019)
PubMed id: 30209408  
 
 
TAK-137, an AMPA-R potentiator with little agonistic effect, has a wide therapeutic window.
A.Kunugi, M.Tanaka, A.Suzuki, Y.Tajima, N.Suzuki, M.Suzuki, S.Nakamura, H.Kuno, A.Yokota, S.Sogabe, Y.Kosugi, Y.Awasaki, T.Kaku, H.Kimura.
 
  ABSTRACT  
 
Activation of α-amino-3-hydroxy-5-methyl-4-isoxazole-propionic acid receptor (AMPA-R) is a promising strategy to treat psychiatric and neurological diseases if issues of bell-shaped response and narrow safety margin against seizure can be overcome. Here, we show that structural interference at Ser743 in AMPA-R is a key to lower the agonistic effect of AMPA-R potentiators containing dihydropyridothiadiazine 2,2-dioxides skeleton. With this structural insight, TAK-137, 9-(4-phenoxyphenyl)-3,4-dihydropyrido[2,1-c][1,2,4]thiadiazine 2,2-dioxide, was discovered as a novel AMPA-R potentiator with a lower agonistic effect than an AMPA-R potentiator LY451646 ((R)-N-(2-(4'-cyanobiphenyl-4-yl)propyl)propane-2-sulfonamide) in rat primary neurons. TAK-137 induced brain-derived neurotrophic factor in neurons in rodents and potently improved cognition in both rats and monkeys. Compared to LY451646, TAK-137 had a wider safety margin against seizure in rats. TAK-137 enhanced neural progenitor proliferation over a broader range of doses in rodents. Thus, TAK-137 is a promising AMPA-R potentiator with potent procognitive effects and lower risks of bell-shaped response and seizure. These data may open the door for the development of AMPA-R potentiators as therapeutic drugs for psychiatric and neurological diseases.
 

 

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