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PDBsum entry 5ydh

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protein ligands metals Protein-protein interface(s) links
Hydrolase PDB id
5ydh

 

 

 

 

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JSmol PyMol  
Contents
Protein chains
538 a.a.
Ligands
NAG-NAG-BMA-MAN
NAG-NAG-BMA-MAN-
MAN
SO4 ×26
NAG ×2
EPE ×3
GOL ×3
Metals
_CO ×2
Waters ×12
PDB id:
5ydh
Name: Hydrolase
Title: Crystal structure of acetylcholinesterase catalytic subunits of the malaria vector anopheles gambiae, 3.2 a
Structure: Acetylcholinesterase. Chain: a, b. Fragment: unp residues 162-737. Synonym: ache. Engineered: yes
Source: Anopheles gambiae. African malaria mosquito. Organism_taxid: 7165. Gene: ace, ace1, ache1, agap001356. Expressed in: komagataella pastoris. Expression_system_taxid: 4922.
Resolution:
3.21Å     R-factor:   0.208     R-free:   0.231
Authors: Q.Han,H.Guan,H.Robinson,H.Ding,C.Liao,J.Li
Date:
13-Sep-17     Release date:   07-Mar-18    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Q869C3  (ACES_ANOGA) -  Acetylcholinesterase from Anopheles gambiae
Seq:
Struc:
 
Seq:
Struc:
737 a.a.
538 a.a.
Key:    Secondary structure

 Enzyme reactions 
   Enzyme class: E.C.3.1.1.7  - acetylcholinesterase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: acetylcholine + H2O = choline + acetate + H+
acetylcholine
Bound ligand (Het Group name = NAG)
matches with 41.18% similarity
+ H2O
=
choline
Bound ligand (Het Group name = GOL)
matches with 42.86% similarity
+ acetate
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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