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PDBsum entry 5y9c

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protein Protein-protein interface(s) links
Structural protein/immune system PDB id
5y9c

 

 

 

 

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Contents
Protein chains
417 a.a.
210 a.a.
203 a.a.
PDB id:
5y9c
Name: Structural protein/immune system
Title: Crystal structure of hpv58 pentamer in complex with the fab fragment of antibody a12a3
Structure: Major capsid protein l1. Chain: a, b, c, d, e. Fragment: unp residues 36-524. Engineered: yes. Heavy chain of fab fragment of antibody a12a3. Chain: h. Light chain of fab fragment of antibody a12a3. Chain: l
Source: Human papillomavirus type 58. Organism_taxid: 10598. Gene: l1. Expressed in: escherichia coli. Expression_system_taxid: 562. Mus musculus. Organism_taxid: 10090. Organism_taxid: 10090
Resolution:
3.44Å     R-factor:   0.205     R-free:   0.249
Authors: S.W.Li,Z.H.Li
Key ref: Z.Li et al. (2017). Crystal structures of two immune complexes identify determinants for viral infectivity and type-Specific neutralization of human papillomavirus.. Mbio, 8, . PubMed id: 28951471
Date:
24-Aug-17     Release date:   25-Oct-17    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
P26535  (VL1_HPV58) -  Major capsid protein L1 from Human papillomavirus 58
Seq:
Struc:
 
Seq:
Struc:
524 a.a.
417 a.a.*
Protein chain
No UniProt id for this chain
Struc: 210 a.a.
Protein chain
No UniProt id for this chain
Struc: 203 a.a.
Key:    PfamA domain  Secondary structure
* PDB and UniProt seqs differ at 1 residue position (black cross)

 

 

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