PDBsum entry 5v6t

Protein binding

PDB id: 5v6t

Contents

Protein chains

516 a.a.

161 a.a.

Ligands

SO4 ×7

Waters ×19

PDB id:

5v6t

Name:

Protein binding

Title:

The plexin d1 intracellular region in complex with gipc1

Structure:

Plexin-d1. Chain: a. Fragment: unp residues 1339-1925. Engineered: yes. Pdz domain-containing protein gipc1. Chain: b. Fragment: unp residues 52-333. Synonym: gaip c-terminus-interacting protein,rgs-gaip-interacting protein,rgs19-interacting protein 1,semaf cytoplasmic domain-

Source:

Mus musculus. Mouse. Organism_taxid: 10090. Gene: plxnd1. Expressed in: escherichia coli. Expression_system_taxid: 562. Gene: gipc1, gipc, rgs19ip1, semcap1. Expression_system_taxid: 562

Resolution:

3.19Å R-factor: 0.182 R-free: 0.216

Authors:

G.Shang,X.Zhang

Key ref:

G.Shang et al. Structure analyses reveal a regulated oligomerization mechanism of the plexind1/gipc/myosin VI complex. Elife, . PubMed id: 28537552

Date:

17-Mar-17 Release date: 31-May-17

Protein chain

Q3UH93  (PLXD1_MOUSE) -  Plexin-D1 from Mus musculus

Seq: 1925 a.a.

Struc: 516 a.a.

Protein chain

Q9Z0G0  (GIPC1_MOUSE) -  PDZ domain-containing protein GIPC1 from Mus musculus

Seq: 333 a.a.

Struc: 161 a.a.