PDBsum entry 5tsx

Viral protein

PDB id: 5tsx

Contents

Protein chains

(+ 4 more) 219 a.a.

207 a.a.

11 a.a.

11 a.a.

Ligands

SER-PRO-SER-GLY-VAL-PHE-THR-PHE-GLY ×3

FLU ×4

Waters ×2179

PDB id:

5tsx

Name:

Viral protein

Title:

HIV-1 ca hexamer with nup153 peptide - p1 crystal form

Structure:

HIV-1 ca protein. Chain: a, b, c, d, e, f, g, h, i, j, k, l. Synonym: pr55gag. Engineered: yes. Nuclear pore complex protein nup153. Chain: m, n, o, p, r, t. Synonym: 153 kda nucleoporin,nucleoporin nup153. Engineered: yes

Source:

Human immunodeficiency virus type 1 group m subtype b (isolate ny5). HIV-1. Organism_taxid: 11698. Strain: isolate ny5. Gene: gag. Expressed in: escherichia coli. Expression_system_taxid: 469008. Synthetic: yes.

Resolution:

1.90Å R-factor: 0.187 R-free: 0.228

Authors:

K.Skorupka,B.K.Ganser-Pornillos,O.Pornillos

Key ref:

K.Skorupka et al. Hiv-1 ca hexamer with nup153 peptide - P1 crystal for. To be published, .

Date:

31-Oct-16 Release date: 08-Nov-17

Protein chains

P12493  (GAG_HV1N5) -  Gag polyprotein from Human immunodeficiency virus type 1 group M subtype B (isolate NY5)

Seq: 500 a.a.

Struc: 219 a.a.*

Protein chains

P12493  (GAG_HV1N5) -  Gag polyprotein from Human immunodeficiency virus type 1 group M subtype B (isolate NY5)

Seq: 500 a.a.

Struc: 207 a.a.*

Protein chains

P49790  (NU153_HUMAN) -  Nuclear pore complex protein Nup153 from Homo sapiens

Seq: 1475 a.a.

Struc: 11 a.a.

Protein chain

P49790  (NU153_HUMAN) -  Nuclear pore complex protein Nup153 from Homo sapiens

Seq: 1475 a.a.

Struc: 11 a.a.

* PDB and UniProt seqs differ at 6 residue positions (black crosses)