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PDBsum entry 5tob

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protein ligands links
Transferase/transferase inhibitor PDB id
5tob

 

 

 

 

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Contents
Protein chain
245 a.a.
Ligands
YAM
Waters ×122
PDB id:
5tob
Name: Transferase/transferase inhibitor
Title: Selectivity switch between fak and pyk2: macrocyclization of fak inhibitors improves pyk2 potency
Structure: Protein-tyrosine kinase 2-beta. Chain: a. Fragment: unp residues 414-692. Synonym: calcium-dependent tyrosine kinase,cadtk,calcium-regulated non-receptor proline-rich tyrosine kinase,cell adhesion kinase beta, cakb,focal adhesion kinase 2,fadk 2,proline-rich tyrosine kinase 2, related adhesion focal tyrosine kinase,raftk. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: ptk2b, fak2, pyk2, raftk. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
2.12Å     R-factor:   0.212     R-free:   0.262
Authors: Z.E.Newby
Key ref: J.Farand et al. (2016). Selectivity switch between FAK and Pyk2: Macrocyclization of FAK inhibitors improves Pyk2 potency. Bioorg Med Chem Lett, 26, 5926-5930. PubMed id: 27876318 DOI: 10.1016/j.bmcl.2016.10.092
Date:
17-Oct-16     Release date:   29-Nov-17    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q14289  (FAK2_HUMAN) -  Protein-tyrosine kinase 2-beta from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
1009 a.a.
245 a.a.
Key:    PfamA domain  Secondary structure

 Enzyme reactions 
   Enzyme class: E.C.2.7.10.2  - non-specific protein-tyrosine kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H+
L-tyrosyl-[protein]
+ ATP
= O-phospho-L-tyrosyl-[protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Added reference    
 
 
DOI no: 10.1016/j.bmcl.2016.10.092 Bioorg Med Chem Lett 26:5926-5930 (2016)
PubMed id: 27876318  
 
 
Selectivity switch between FAK and Pyk2: Macrocyclization of FAK inhibitors improves Pyk2 potency.
J.Farand, N.Mai, J.Chandrasekhar, Z.E.Newby, J.Van Veldhuizen, J.Loyer-Drew, C.Venkataramani, J.Guerrero, A.Kwok, N.Li, Y.Zherebina, S.Wilbert, J.Zablocki, G.Phillips, W.J.Watkins, R.Mourey, G.T.Notte.
 
  ABSTRACT  
 
No abstract given.

 

 

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