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PDBsum entry 5sfh

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protein ligands metals Protein-protein interface(s) links
Hydrolase/hydrolase inhibitor PDB id
5sfh

 

 

 

 

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JSmol PyMol  
Contents
Protein chains
313 a.a.
Ligands
IKO ×4
Metals
_ZN ×4
_MG ×4
Waters ×342
PDB id:
5sfh
Name: Hydrolase/hydrolase inhibitor
Title: Crystal structure of human phosphodiesterase 10 in complex with n(c1cc1)(c)c2nn(c(n2)ccc4nn3c(cnc(c3n4)c)c)c, micromolar ic50=0.042255
Structure: Camp and camp-inhibited cgmp 3',5'-cyclic phosphodiesterase 10a. Chain: a, b, c, d. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: pde10a. Expressed in: escherichia coli. Expression_system_taxid: 469008.
Resolution:
2.29Å     R-factor:   0.176     R-free:   0.221
Authors: C.Joseph,A.Flohr,J.Benz,D.Schlatter,M.G.Rudolph
Key ref: A.Tosstorff et al. (2022). A high quality, Industrial data set for binding affin prediction: performance comparison in different early discovery scenarios.. J comput aided mol des, 36, 753. PubMed id: 36153472
Date:
21-Jan-22     Release date:   12-Oct-22    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q9Y233  (PDE10_HUMAN) -  cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1055 a.a.
313 a.a.*
Key:    PfamA domain  Secondary structure
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class: E.C.3.1.4.17  - 3',5'-cyclic-nucleotide phosphodiesterase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: a nucleoside 3',5'-cyclic phosphate + H2O = a nucleoside 5'-phosphate + H+
nucleoside 3',5'-cyclic phosphate
+ H2O
= nucleoside 5'-phosphate
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 

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