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PDBsum entry 5nrf

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protein ligands links
Hydrolase PDB id
5nrf

 

 

 

 

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Contents
Protein chain
377 a.a.
Ligands
95Q
GOL
Waters ×200
PDB id:
5nrf
Name: Hydrolase
Title: Crystal structure of human chitotriosidase-1 (hchit) catalytic domain in complex with compound 7i
Structure: Chitotriosidase-1. Chain: a. Synonym: chitinase-1. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: chit1. Expressed in: homo sapiens. Expression_system_taxid: 9606
Resolution:
1.45Å     R-factor:   0.145     R-free:   0.169
Authors: M.Mazur,J.Olczak,S.Olejniczak,R.Koralewski,W.Czestkowski, A.Jedrzejczak,J.Golab,K.Dzwonek,B.Dymek,P.Sklepkiewicz,A.Zagozdzon, T.Noonan,K.Mahboubi,B.Conway,R.Sheeler,P.Beckett,W.M.Hungerford, A.Podjarny,A.Mitschler,A.Cousido-Siah,F.Fadel,A.Golebiowski
Key ref: M.Mazur et al. (2018). Targeting Acidic Mammalian chitinase Is Effective in Animal Model of Asthma. J Med Chem, 61, 695-710. PubMed id: 29283260 DOI: 10.1021/acs.jmedchem.7b01051
Date:
22-Apr-17     Release date:   28-Mar-18    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Q13231  (CHIT1_HUMAN) -  Chitotriosidase-1 from Homo sapiens
Seq:
Struc:
466 a.a.
377 a.a.*
Key:    Secondary structure
* PDB and UniProt seqs differ at 9 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class: E.C.3.2.1.14  - chitinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: Hydrolysis of the 1,4-beta-linkages of N-acetyl-D-glucosamine polymers of chitin.

 

 
DOI no: 10.1021/acs.jmedchem.7b01051 J Med Chem 61:695-710 (2018)
PubMed id: 29283260  
 
 
Targeting Acidic Mammalian chitinase Is Effective in Animal Model of Asthma.
M.Mazur, J.Olczak, S.Olejniczak, R.Koralewski, W.Czestkowski, A.Jedrzejczak, J.Golab, K.Dzwonek, B.Dymek, P.L.Sklepkiewicz, A.Zagozdzon, T.Noonan, K.Mahboubi, B.Conway, R.Sheeler, P.Beckett, W.M.Hungerford, A.Podjarny, A.Mitschler, A.Cousido-Siah, F.Fadel, A.Golebiowski.
 
  ABSTRACT  
 
This article highlights our work toward the identification of a potent, selective, and efficacious acidic mammalian chitinase (AMCase) inhibitor. Rational design, guided by X-ray analysis of several inhibitors bound to human chitotriosidase (hCHIT1), led to the identification of compound 7f as a highly potent AMCase inhibitor (IC50values of 14 and 19 nM against human and mouse enzyme, respectively) and selective (>150× against mCHIT1) with very good PK properties. This compound dosed once daily at 30 mg/kg po showed significant anti-inflammatory efficacy in HDM-induced allergic airway inflammation in mice, reducing inflammatory cell influx in the BALF and total IgE concentration in plasma, which correlated with decrease of chitinolytic activity. Therapeutic efficacy of compound 7f in the clinically relevant aeroallergen-induced acute asthma model in mice provides a rationale for developing AMCase inhibitor for the treatment of asthma.
 

 

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