PDBsum entry 5mbb

Lyase

PDB id: 5mbb

Contents

Protein chains

338 a.a.

Ligands

FMN ×2

PDB id:

5mbb

Name:

Lyase

Title:

Structure of a bacterial light-regulated adenylyl cylcase

Structure:

Beta subunit of photoactivated adenylyl cyclase. Chain: a, b. Fragment: beggiatoa photoactivatable adenylyl cyclase bpac. Engineered: yes

Source:

Beggiatoa sp. Ps. Organism_taxid: 422289. Gene: bgp_1043. Expressed in: escherichia coli. Expression_system_taxid: 469008.

Resolution:

3.10Å R-factor: 0.200 R-free: 0.234

Authors:

R.Lindner,E.Hartmann,M.Tarnawski,A.Winkler,D.Frey,J.Reinstein, A.Meinhart,I.Schlichting

Key ref:

R.Lindner et al. (2017). Photoactivation Mechanism of a Bacterial Light-Regulated Adenylyl Cyclase. J Mol Biol, 429, 1336-1351. PubMed id: 28336405 DOI: 10.1016/j.jmb.2017.03.020

Date:

08-Nov-16 Release date: 05-Apr-17

Protein chains

A7BT71  (A7BT71_9GAMM) -

DOI no: 10.1016/j.jmb.2017.03.020

J Mol Biol 429:1336-1351 (2017)

PubMed id: 28336405

Photoactivation Mechanism of a Bacterial Light-Regulated Adenylyl Cyclase.

R.Lindner, E.Hartmann, M.Tarnawski, A.Winkler, D.Frey, J.Reinstein, A.Meinhart, I.Schlichting.

ABSTRACT

Light-regulated enzymes enable organisms to quickly respond to changing light conditions. We characterize a photoactivatable adenylyl cyclase (AC) from Beggiatoa sp. (bPAC) that translates a blue light signal into the production of the second messenger cyclic AMP. bPAC contains a BLUF photoreceptor domain that senses blue light using a flavin chromophore, linked to an AC domain. We present a dark state crystal structure of bPAC that closely resembles the recently published structure of the homologous OaPAC from Oscillatoria acuminata. To elucidate the structural mechanism of light-dependent AC activation by the BLUF domain, we determined the crystal structures of illuminated bPAC and of a pseudo-lit state variant. We use hydrogen-deuterium exchange measurements of secondary structure dynamics and hypothesis-driven point mutations to trace the activation pathway from the chromophore in the BLUF domain to the active site of the cyclase. The structural changes are relayed from the residues interacting with the excited chromophore through a conserved kink of the BLUF β-sheet to a tongue-like extrusion of the AC domain that regulates active site opening and repositions catalytic residues. Our findings not only show the specific molecular pathway of photoactivation in BLUF-regulated ACs but also have implications for the general understanding of signaling in BLUF domains and of the activation of ACs.