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PDBsum entry 5hdr

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protein ligands Protein-protein interface(s) links
Hydrolase PDB id
5hdr

 

 

 

 

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Contents
Protein chains
440 a.a.
Ligands
SO4 ×5
IMD ×4
H79 ×4
Waters ×445
PDB id:
5hdr
Name: Hydrolase
Title: Crystal structure of a bacterial fucosidase with iminocyclitol (2s,3s, 4r,5s)-3,4-dihydroxy-2-ethynyl-5-methylpyrrolidine
Structure: Alpha-l-fucosidase. Chain: a, b, c, d. Engineered: yes
Source: Bacteroides thetaiotaomicron. Organism_taxid: 226186. Strain: atcc 29148 / dsm 2079 / nctc 10582 / e50 / vpi-5482. Gene: bt_2970. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Resolution:
2.30Å     R-factor:   0.203     R-free:   0.244
Authors: D.W.Wright,G.J.Davies
Key ref: D.W.Wright and g.j.davies Crystal structure of a bacterial fucosidase with iminocyclitol (2s,3s,4r,5s)-3,4-Dihydroxy-2-Ethynyl-5-Methylpyrroli. To be published, .
Date:
05-Jan-16     Release date:   03-Feb-16    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q8A3I4  (Q8A3I4_BACTN) -  Alpha-L-fucosidase from Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50)
Seq:
Struc:
484 a.a.
440 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 

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