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PDBsum entry 5dv8

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protein ligands links
Transcription/transferase PDB id
5dv8

 

 

 

 

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JSmol PyMol  
Contents
Protein chain
269 a.a.
Ligands
HIS-LYS-ILE-LEU-
HIS-ARG-LEU-LEU-
GLN-GLU
T51
Waters ×39
PDB id:
5dv8
Name: Transcription/transferase
Title: Human ppargamma ligand binding dmain complexed with sb1451 in a covalent bonded form
Structure: Peroxisome proliferator-activated receptor gamma. Chain: a. Fragment: unp residues 223-505. Synonym: ppar-gamma,nuclear receptor subfamily 1 group c member 3. Engineered: yes. Nuclear receptor coactivator 1. Chain: b. Fragment: unp residues 685-700. Synonym: ncoa-1,class e basic helix-loop-helix protein 74,bhlhe74,
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: pparg, nr1c3. Expressed in: escherichia coli. Expression_system_taxid: 562. Synthetic: yes. Organism_taxid: 9606
Resolution:
2.75Å     R-factor:   0.194     R-free:   0.243
Authors: J.Y.Jang
Key ref: J.Y.Jang Human ppargamma ligand binding dmain complexed with s in a covalent bonded form. To be published, .
Date:
21-Sep-15     Release date:   21-Sep-16    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P37231  (PPARG_HUMAN) -  Peroxisome proliferator-activated receptor gamma from Homo sapiens
Seq:
Struc:
505 a.a.
269 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.3.1.48  - histone acetyltransferase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: L-lysyl-[protein] + acetyl-CoA = N6-acetyl-L-lysyl-[protein] + CoA + H+
L-lysyl-[protein]
+ acetyl-CoA
= N(6)-acetyl-L-lysyl-[protein]
+ CoA
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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