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PDBsum entry 5dv8
Go to PDB code:
Transcription/transferase
PDB id
5dv8
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Contents
Protein chain
269 a.a.
Ligands
HIS-LYS-ILE-LEU-
HIS-ARG-LEU-LEU-
GLN-GLU
T51
Waters
×39
PDB id:
5dv8
Links
PDBe
RCSB
MMDB
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Proteopedia
CATH
SCOP
PDBSWS
PDBePISA
ProSAT
Name:
Transcription/transferase
Title:
Human ppargamma ligand binding dmain complexed with sb1451 in a covalent bonded form
Structure:
Peroxisome proliferator-activated receptor gamma. Chain: a. Fragment: unp residues 223-505. Synonym: ppar-gamma,nuclear receptor subfamily 1 group c member 3. Engineered: yes. Nuclear receptor coactivator 1. Chain: b. Fragment: unp residues 685-700. Synonym: ncoa-1,class e basic helix-loop-helix protein 74,bhlhe74,
Source:
Homo sapiens. Human. Organism_taxid: 9606. Gene: pparg, nr1c3. Expressed in: escherichia coli. Expression_system_taxid: 562. Synthetic: yes. Organism_taxid: 9606
Resolution:
2.75Å
R-factor:
0.194
R-free:
0.243
Authors:
J.Y.Jang
Key ref:
J.Y.Jang Human ppargamma ligand binding dmain complexed with s in a covalent bonded form.
To be published
, .
Date:
21-Sep-15
Release date:
21-Sep-16
PROCHECK
Headers
References
Protein chain
?
P37231
(PPARG_HUMAN) - Peroxisome proliferator-activated receptor gamma from Homo sapiens
Seq:
Struc:
505 a.a.
269 a.a.
Key:
PfamA domain
Secondary structure
CATH domain
Enzyme reactions
Enzyme class:
E.C.2.3.1.48
- histone acetyltransferase.
[IntEnz]
[ExPASy]
[KEGG]
[BRENDA]
Reaction:
L-lysyl-[protein] + acetyl-CoA = N
6
-acetyl-L-lysyl-[protein] + CoA + H
+
L-lysyl-[protein]
+
acetyl-CoA
=
N(6)-acetyl-L-lysyl-[protein]
+
CoA
+
H(+)
Molecule diagrams generated from .mol files obtained from the
KEGG ftp site
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