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PDBsum entry 5drs

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protein ligands metals links
Lyase PDB id
5drs

 

 

 

 

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Contents
Protein chain
257 a.a.
Ligands
BCN
DMS
MES
5EF
Metals
_ZN
Waters ×250
PDB id:
5drs
Name: Lyase
Title: Crystal structure of human carbonic anhydraseisozyme ii with 3-[(1s)- 2,3-dihydro-1h-inden-1-ylamino]-2,5,6-trifluoro-4-[(2-hydroxyethyl) sulfonyl]benzenesulfonamide
Structure: Carbonic anhydrase 2. Chain: a. Fragment: human carbonic anhydrase ii. Synonym: carbonate dehydratase ii,carbonic anhydrasE C,cac,carbonic anhydrase ii,ca-ii. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: ca2. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Resolution:
1.10Å     R-factor:   0.147     R-free:   0.173
Authors: A.Smirnov,E.Manakova,S.Grazulis
Key ref: A.Zubrienė et al. (2017). Intrinsic Thermodynamics and Structures of 2,4- and 3,4-Substituted Fluorinated Benzenesulfonamides Binding to Carbonic Anhydrases. Chemmedchem, 12, 161-176. PubMed id: 28001003 DOI: 10.1002/cmdc.201600509
Date:
16-Sep-15     Release date:   28-Sep-16    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P00918  (CAH2_HUMAN) -  Carbonic anhydrase 2 from Homo sapiens
Seq:
Struc:
260 a.a.
257 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class 2: E.C.4.2.1.1  - carbonic anhydrase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: hydrogencarbonate + H+ = CO2 + H2O
hydrogencarbonate
+ H(+)
= CO2
+ H2O
      Cofactor: Zn(2+)
   Enzyme class 3: E.C.4.2.1.69  - cyanamide hydratase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: urea = cyanamide + H2O
urea
= cyanamide
+ H2O
Note, where more than one E.C. class is given (as above), each may correspond to a different protein domain or, in the case of polyprotein precursors, to a different mature protein.
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    reference    
 
 
DOI no: 10.1002/cmdc.201600509 Chemmedchem 12:161-176 (2017)
PubMed id: 28001003  
 
 
Intrinsic Thermodynamics and Structures of 2,4- and 3,4-Substituted Fluorinated Benzenesulfonamides Binding to Carbonic Anhydrases.
A.Zubrienė, A.Smirnov, V.Dudutienė, D.D.Timm, J.Matulienė, V.Michailovienė, A.Zakšauskas, E.Manakova, S.Gražulis, D.Matulis.
 
  ABSTRACT  
 
No abstract given.

 

 

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