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PDBsum entry 5cc7

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protein ligands metals links
Transferase PDB id
5cc7

 

 

 

 

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JSmol PyMol  
Contents
Protein chain
704 a.a.
Ligands
1F1
Metals
_MG
Waters ×726
PDB id:
5cc7
Name: Transferase
Title: Crystal structure of mycobacterium tuberculosis malate synthase in complex with 1h-indole-6-carboxylic acid
Structure: Malate synthase g. Chain: a. Engineered: yes. Mutation: yes
Source: Mycobacterium tuberculosis (strain atcc 25618 / h37rv). Organism_taxid: 83332. Strain: atcc 25618 / h37rv. Gene: glcb, rv1837c, mtcy1a11.06. Expressed in: escherichia coli. Expression_system_taxid: 511693.
Resolution:
2.12Å     R-factor:   0.189     R-free:   0.252
Authors: H.-L.Huang,J.C.Sacchettini
Key ref: H.-L.Huang et al. Crystal structures of fragment-Bound malate synthase mycobacterium tuberculosis provide insights into mech and potential inhibitor designs. To be published, .
Date:
01-Jul-15     Release date:   10-Aug-16    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P9WK17  (MASZ_MYCTU) -  Malate synthase G from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Seq:
Struc:
 
Seq:
Struc:
741 a.a.
704 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class: E.C.2.3.3.9  - malate synthase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

      Pathway:
Glyoxylate Cycle
      Reaction: glyoxylate + acetyl-CoA + H2O = (S)-malate + CoA + H+
glyoxylate
+ acetyl-CoA
+ H2O
=
(S)-malate
Bound ligand (Het Group name = 1F1)
matches with 40.00% similarity
+ CoA
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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