PDBsum entry 5dei

Lyase

PDB id: 5dei

Contents

Protein chains

524 a.a.

Ligands

BCT ×4

TPP ×4

Metals

_CA ×6

_MG ×8

Waters ×2353

PDB id:

5dei

Name:

Lyase

Title:

Benzoylformate decarboxylase from pseudomonas putida

Structure:

Benzoylformate decarboxylase. Chain: a, b, c, d. Synonym: bfdc. Engineered: yes

Source:

Pseudomonas putida. Organism_taxid: 303. Strain: rf4738. Gene: mdlc. Expressed in: escherichia coli. Expression_system_taxid: 562.

Resolution:

1.30Å R-factor: 0.136 R-free: 0.148

Authors:

A.K.Bera,M.S.Hasson

Key ref:

A.K.Bera and m.s.hasson Benzoylformate decarboxylase from pseudomonas putida. To be published, .

Date:

25-Aug-15 Release date: 16-Sep-15

Protein chains

P20906  (MDLC_PSEPU) -  Benzoylformate decarboxylase from Pseudomonas putida

Seq: 528 a.a.

Struc: 524 a.a.

Enzyme reactions

• Enzyme class: E.C.4.1.1.7 - benzoylformate decarboxylase.
• Reaction: phenylglyoxylate + H⁺ = benzaldehyde + CO2

phenylglyoxylate + H(+) = benzaldehyde + CO2 (Bound ligand (Het Group name = BCT) matches with 75.00% similarity)

• Cofactor: Thiamine diphosphate

Thiamine diphosphate (Bound ligand (Het Group name = TPP) corresponds exactly)

Molecule diagrams generated from .mol files obtained from the KEGG ftp site