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PDBsum entry 4ztq

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protein ligands links
Transferase PDB id
4ztq

 

 

 

 

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JSmol PyMol  
Contents
Protein chain
247 a.a.
Ligands
4RM
MPD
Waters ×3
PDB id:
4ztq
Name: Transferase
Title: Human aurora a catalytic domain bound to fk932
Structure: Aurora kinase a. Chain: a. Fragment: residues 122-403. Synonym: aurora 2,aurora/ipl1-related kinase 1,hark1,breast tumor- amplified kinase,serine/threonine-protein kinase 15,serine/threonine- protein kinase 6,serine/threonine-protein kinase aurora-a. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: aurka, aik, airk1, ark1, aura, ayk1, btak, iak1, stk15, stk6. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
2.80Å     R-factor:   0.203     R-free:   0.246
Authors: M.J.Marcaida,F.Kilchmann,T.Schick,J.L.Reymond
Key ref: F.Kilchmann et al. (2016). Discovery of a Selective Aurora A Kinase Inhibitor by Virtual Screening. J Med Chem, 59, 7188-7211. PubMed id: 27391133 DOI: 10.1021/acs.jmedchem.6b00709
Date:
14-May-15     Release date:   20-Jul-16    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
O14965  (AURKA_HUMAN) -  Aurora kinase A from Homo sapiens
Seq:
Struc:
403 a.a.
247 a.a.
Key:    Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.7.11.1  - non-specific serine/threonine protein kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction:
1. L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H+
2. L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H+
L-seryl-[protein]
+ ATP
= O-phospho-L-seryl-[protein]
+ ADP
+ H(+)
L-threonyl-[protein]
+ ATP
= O-phospho-L-threonyl-[protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    reference    
 
 
DOI no: 10.1021/acs.jmedchem.6b00709 J Med Chem 59:7188-7211 (2016)
PubMed id: 27391133  
 
 
Discovery of a Selective Aurora A Kinase Inhibitor by Virtual Screening.
F.Kilchmann, M.J.Marcaida, S.Kotak, T.Schick, S.D.Boss, M.Awale, P.Gönczy, J.L.Reymond.
 
  ABSTRACT  
 
Here we report the discovery of a selective inhibitor of Aurora A, a key regulator of cell division and potential anticancer target. We used the atom category extended ligand overlap score (xLOS), a 3D ligand-based virtual screening method recently developed in our group, to select 437 shape and pharmacophore analogs of reference kinase inhibitors. Biochemical screening uncovered two inhibitor series with scaffolds unprecedented among kinase inhibitors. One of them was successfully optimized by structure-based design to a potent Aurora A inhibitor (IC50 = 2 nM) with very high kinome selectivity for Aurora kinases. This inhibitor locks Aurora A in an inactive conformation and disrupts binding to its activator protein TPX2, which impairs Aurora A localization at the mitotic spindle and induces cell division defects. This phenotype can be rescued by inhibitor-resistant Aurora A mutants. The inhibitor furthermore does not induce Aurora B specific effects in cells.
 

 

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