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PDBsum entry 4zr5

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protein ligands metals Protein-protein interface(s) links
Hydrolase PDB id
4zr5

 

 

 

 

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JSmol PyMol  
Contents
Protein chains
696 a.a.
Ligands
NAG-NAG ×4
RDF ×2
NAG ×2
Metals
_ZN ×2
Waters ×271
PDB id:
4zr5
Name: Hydrolase
Title: Soluble rabbit neprilysin in complex with phosphoramidon
Structure: Neprilysin. Chain: a, b. Synonym: atriopeptidase,enkephalinase,neutral endopeptidase 24.11, neutral endopeptidase,skin fibroblast elastase,sfe. Engineered: yes
Source: Oryctolagus cuniculus. Rabbit. Organism_taxid: 9986. Gene: mme. Expressed in: pichia pastoris. Expression_system_taxid: 4922. Expression_system_variant: his4-
Resolution:
2.80Å     R-factor:   0.194     R-free:   0.227
Authors: S.L.Labiuk,P.Grochulski,J.Sygusch
Key ref: S.L.Labiuk et al. (2019). Structures of soluble rabbit neprilysin complexed with phosphoramidon or thiorphan. Acta Crystallogr F Struct Biol Commun, 75, 405-411. PubMed id: 31204686 DOI: 10.1107/S2053230X19006046
Date:
11-May-15     Release date:   08-Jun-16    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
P08049  (NEP_RABIT) -  Neprilysin from Oryctolagus cuniculus
Seq:
Struc:
 
Seq:
Struc:
750 a.a.
696 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 4 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class: E.C.3.4.24.11  - neprilysin.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: Preferential cleavage at the amino group of hydrophobic residues in insulin, casein, hemoglobin, and a number of other proteins and polypeptides.
      Cofactor: Zn(2+)

 

 
DOI no: 10.1107/S2053230X19006046 Acta Crystallogr F Struct Biol Commun 75:405-411 (2019)
PubMed id: 31204686  
 
 
Structures of soluble rabbit neprilysin complexed with phosphoramidon or thiorphan.
S.L.Labiuk, J.Sygusch, P.Grochulski.
 
  ABSTRACT  
 
Neutral endopeptidase (neprilysin; NEP) is a proteinase that cleaves a wide variety of peptides and has been implicated in Alzheimer's disease, cardiovascular conditions, arthritis and other inflammatory diseases. The structure of the soluble extracellular domain (residues 55-750) of rabbit neprilysin was solved both in its native form at 2.1 Å resolution, and bound to the inhibitors phosphoramidon and thiorphan at 2.8 and 3.0 Å resolution, respectively. Consistent with the extracellular domain of human neprilysin, the structure reveals a large central cavity which contains the active site and the location for inhibitor binding.
 

 

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