spacer
spacer

PDBsum entry 4zbr

Go to PDB code: 
protein ligands links
Transport protein PDB id
4zbr

 

 

 

 

Loading ...

 
JSmol PyMol  
Contents
Protein chain
580 a.a.
Ligands
DIF
NPS ×2
SIN
LMR ×2
ACT ×2
FMT ×2
MLI
Waters ×256
PDB id:
4zbr
Name: Transport protein
Title: Crystal structure of equine serum albumin in complex with diclofenac and naproxen
Structure: Serum albumin. Chain: a. Fragment: unp residues 25-607
Source: Equus caballus. Horse. Organism_taxid: 9796. Organ: blood
Resolution:
2.19Å     R-factor:   0.177     R-free:   0.225
Authors: B.Sekula,A.Bujacz,G.Bujacz
Key ref: B.Sekula and A.Bujacz (2016). Structural Insights into the Competitive Binding of Diclofenac and Naproxen by Equine Serum Albumin. J Med Chem, 59, 82-89. PubMed id: 26652101 DOI: 10.1021/acs.jmedchem.5b00909
Date:
15-Apr-15     Release date:   23-Dec-15    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P35747  (ALBU_HORSE) -  Albumin from Equus caballus
Seq:
Struc:
 
Seq:
Struc:
607 a.a.
580 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 4 residue positions (black crosses)

 

 
DOI no: 10.1021/acs.jmedchem.5b00909 J Med Chem 59:82-89 (2016)
PubMed id: 26652101  
 
 
Structural Insights into the Competitive Binding of Diclofenac and Naproxen by Equine Serum Albumin.
B.Sekula, A.Bujacz.
 
  ABSTRACT  
 
The binding modes to equine serum albumin (ESA) of two nonsteroidal anti-inflammatory drugs (NSAIDs), diclofenac (Dic) and naproxen (Nps), were studied by X-ray crystallography and isothermal titration calorimetry. On the basis of the crystal structure of ESA/Dic determined to a resolution of 1.92 Å and the structure of the previously described ESA/Nps complex (2.42 Å), it was found that both NSAIDs bind within drug site 2 (DS2) of ESA and both occupy secondary binding sites in separate cavities of domain II (Nps) and domain III (Dic). The two structures of the ternary complex ESA/Dic/Nps, obtained by competitive cocrystallization (2.19 Å) and through a displacement experiment (2.35 Å), were determined to investigate possible competition of these widely used pharmaceutical drugs in binding to ESA. In these complexes Nps occupies the DS2 pocket common for both drugs, whereas the other distinct binding sites of Dic and Nps remain unaffected. These results suggest that combined application of both drugs may result in increased concentration of free diclofenac in plasma.
 

 

spacer

spacer