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PDBsum entry 4xj0

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protein ligands Protein-protein interface(s) links
Transferase/transferase inhibitor PDB id
4xj0

 

 

 

 

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JSmol PyMol  
Contents
Protein chains
346 a.a.
Ligands
41B ×2
Waters ×120
PDB id:
4xj0
Name: Transferase/transferase inhibitor
Title: Crystal structure of erk2 in complex with an inhibitor 14k
Structure: Mitogen-activated protein kinase 1. Chain: a, b. Fragment: residues 12-360. Synonym: mapk 1,ert1,extracellular signal-regulated kinase 2,erk-2, map kinase isoform p42,p42-mapk,mitogen-activated protein kinase 2, mapk 2. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: mapk1, erk2, prkm1, prkm2. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
2.58Å     R-factor:   0.210     R-free:   0.244
Authors: J.Yin,W.Wang
Key ref: L.Ren et al. (2015). Discovery of highly potent, selective, and efficacious small molecule inhibitors of ERK1/2. J Med Chem, 58, 1976-1991. PubMed id: 25603482 DOI: 10.1021/jm501921k
Date:
08-Jan-15     Release date:   16-Sep-15    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
P28482  (MK01_HUMAN) -  Mitogen-activated protein kinase 1 from Homo sapiens
Seq:
Struc:
360 a.a.
346 a.a.*
Key:    Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class: E.C.2.7.11.24  - mitogen-activated protein kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction:
1. L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H+
2. L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H+
L-seryl-[protein]
+ ATP
= O-phospho-L-seryl-[protein]
+ ADP
+ H(+)
L-threonyl-[protein]
+ ATP
= O-phospho-L-threonyl-[protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    reference    
 
 
DOI no: 10.1021/jm501921k J Med Chem 58:1976-1991 (2015)
PubMed id: 25603482  
 
 
Discovery of highly potent, selective, and efficacious small molecule inhibitors of ERK1/2.
L.Ren, J.Grina, D.Moreno, J.F.Blake, J.J.Gaudino, R.Garrey, A.T.Metcalf, M.Burkard, M.Martinson, K.Rasor, H.Chen, B.Dean, S.E.Gould, P.Pacheco, S.Shahidi-Latham, J.Yin, K.West, W.Wang, J.G.Moffat, J.B.Schwarz.
 
  ABSTRACT  
 
Using structure-based design, a novel series of pyridone ERK1/2 inhibitors was developed. Optimization led to the identification of (S)-14k, a potent, selective, and orally bioavailable agent that inhibited tumor growth in mouse xenograft models. On the basis of its in vivo efficacy and preliminary safety profiles, (S)-14k was selected for further preclinical evaluation.
 

 

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