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PDBsum entry 4olv

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protein ligands Protein-protein interface(s) links
Viral protein/immune system PDB id
4olv

 

 

 

 

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Contents
Protein chains
342 a.a.
228 a.a.
208 a.a.
Ligands
NAG ×11
Waters ×294
PDB id:
4olv
Name: Viral protein/immune system
Title: Crystal structure of antibody vrc07-g54f in complex with clade a/e 93th057 HIV-1 gp120 core
Structure: Envelope glycoprotein gp160. Chain: g. Fragment: unp residues 43-122, 201-303, 325-486. Engineered: yes. Antigen binding fragment of heavy chain: antibody vrc01. Chain: h. Engineered: yes. Antigen binding fragment of light chain: antibody vrc01. Chain: l.
Source: Human immunodeficiency virus 1. Organism_taxid: 11676. Strain: 93th057. Gene: env, pol. Expressed in: homo sapiens. Expression_system_taxid: 9606. Expression_system_cell_line: hek293f. Other_details: HIV-1 gp120 with leader sequence. Homo sapiens.
Resolution:
2.50Å     R-factor:   0.206     R-free:   0.253
Authors: Y.D.Kwon,P.D.Kwong
Key ref: R.S.Rudicell et al. (2014). Enhanced potency of a broadly neutralizing HIV-1 antibody in vitro improves protection against lentiviral infection in vivo. J Virol, 88, 12669-12682. PubMed id: 25142607 DOI: 10.1128/JVI.02213-14
Date:
25-Jan-14     Release date:   03-Sep-14    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q0ED31  (Q0ED31_HV1) -  Envelope glycoprotein gp160 from Human immunodeficiency virus type 1
Seq:
Struc:
 
Seq:
Struc:
857 a.a.
342 a.a.*
Protein chain
No UniProt id for this chain
Struc: 228 a.a.
Protein chain
No UniProt id for this chain
Struc: 208 a.a.
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 

 
DOI no: 10.1128/JVI.02213-14 J Virol 88:12669-12682 (2014)
PubMed id: 25142607  
 
 
Enhanced potency of a broadly neutralizing HIV-1 antibody in vitro improves protection against lentiviral infection in vivo.
R.S.Rudicell, Y.D.Kwon, S.Y.Ko, A.Pegu, M.K.Louder, I.S.Georgiev, X.Wu, J.Zhu, J.C.Boyington, X.Chen, W.Shi, Z.Y.Yang, N.A.Doria-Rose, K.McKee, S.O'Dell, S.D.Schmidt, G.Y.Chuang, A.Druz, C.Soto, Y.Yang, B.Zhang, T.Zhou, J.P.Todd, K.E.Lloyd, J.Eudailey, K.E.Roberts, B.R.Donald, R.T.Bailer, J.Ledgerwood, J.C.Mullikin, L.Shapiro, R.A.Koup, B.S.Graham, M.C.Nason, M.Connors, B.F.Haynes, S.S.Rao, M.Roederer, P.D.Kwong, J.R.Mascola, G.J.Nabel.
 
  ABSTRACT  
 
No abstract given.

 

 

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