spacer
spacer

PDBsum entry 4jzj

Go to PDB code: 
protein ligands Protein-protein interface(s) links
Cytokine receptor/immune system PDB id
4jzj

 

 

 

 

Loading ...

 
JSmol PyMol  
Contents
Protein chains
250 a.a.
214 a.a.
219 a.a.
Ligands
NAG-NAG-BMA-MAN-
MAN-FUL-FUL
NAG-NAG-BMA-FUL-
FUL
NAG-FUC-FUL
NAG ×2
GOL ×2
Waters ×39
PDB id:
4jzj
Name: Cytokine receptor/immune system
Title: Crystal structure of receptor-fab complex
Structure: Interleukin-3 receptor subunit alpha. Chain: c, d. Fragment: domain 2, domain 3, unp residues 20-307. Synonym: il-3 receptor subunit alpha, il-3r subunit alpha, il-3r- alpha, il-3ra. Engineered: yes. Mutation: yes. Fab heavy chain. Chain: a, h.
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: il3ra. Expressed in: spodoptera frugiperda. Expression_system_taxid: 7108. Expression_system_cell_line: sf9. Mus musculus. Mouse.
Resolution:
2.80Å     R-factor:   0.188     R-free:   0.244
Authors: S.E.Broughton,M.W.Parker
Key ref: S.E.Broughton et al. (2014). Dual mechanism of interleukin-3 receptor blockade by an anti-cancer antibody. Cell Rep, 8, 410-419. PubMed id: 25043189 DOI: 10.1016/j.celrep.2014.06.038
Date:
03-Apr-13     Release date:   09-Apr-14    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
P26951  (IL3RA_HUMAN) -  Interleukin-3 receptor subunit alpha from Homo sapiens
Seq:
Struc:
378 a.a.
250 a.a.*
Protein chains
No UniProt id for this chain
Struc: 214 a.a.
Protein chains
No UniProt id for this chain
Struc: 219 a.a.
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 

 
DOI no: 10.1016/j.celrep.2014.06.038 Cell Rep 8:410-419 (2014)
PubMed id: 25043189  
 
 
Dual mechanism of interleukin-3 receptor blockade by an anti-cancer antibody.
S.E.Broughton, T.R.Hercus, M.P.Hardy, B.J.McClure, T.L.Nero, M.Dottore, H.Huynh, H.Braley, E.F.Barry, W.L.Kan, U.Dhagat, P.Scotney, D.Hartman, S.J.Busfield, C.M.Owczarek, A.D.Nash, N.J.Wilson, M.W.Parker, A.F.Lopez.
 
  ABSTRACT  
 
Interleukin-3 (IL-3) is an activated T cell product that bridges innate and adaptive immunity and contributes to several immunopathologies. Here, we report the crystal structure of the IL-3 receptor α chain (IL3Rα) in complex with the anti-leukemia antibody CSL362 that reveals the N-terminal domain (NTD), a domain also present in the granulocyte-macrophage colony-stimulating factor (GM-CSF), IL-5, and IL-13 receptors, adopting unique "open" and classical "closed" conformations. Although extensive mutational analyses of the NTD epitope of CSL362 show minor overlap with the IL-3 binding site, CSL362 only inhibits IL-3 binding to the closed conformation, indicating alternative mechanisms for blocking IL-3 signaling. Significantly, whereas "open-like" IL3Rα mutants can simultaneously bind IL-3 and CSL362, CSL362 still prevents the assembly of a higher-order IL-3 receptor-signaling complex. The discovery of open forms of cytokine receptors provides the framework for development of potent antibodies that can achieve a "double hit" cytokine receptor blockade.
 

 

spacer

spacer