spacer
spacer

PDBsum entry 4j9h

Go to PDB code: 
protein ligands Protein-protein interface(s) links
Transferase/unknown function PDB id
4j9h

 

 

 

 

Loading ...

 
JSmol PyMol  
Contents
Protein chains
59 a.a.
56 a.a.
(+ 0 more) 11 a.a.
Ligands
SO4
Waters ×384
PDB id:
4j9h
Name: Transferase/unknown function
Title: Crystal structure of the abl-sh3 domain complexed with the designed high-affinity peptide ligand p7 at ph 8
Structure: Tyrosine-protein kinase abl1. Chain: a, b, c, d, e, f. Fragment: sh3 domain. Synonym: abelson murine leukemia viral oncogene homolog 1, abelson tyrosine-protein kinase 1, proto-oncogenE C-abl, p150. Engineered: yes. P7. Chain: g, h, i, j, k, l. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Strain: pbat4. Gene: abl, abl1, jtk7. Expressed in: escherichia coli. Expression_system_taxid: 469008. Synthetic: yes. Other_details: this sequence has been optimized to increase the
Resolution:
1.70Å     R-factor:   0.161     R-free:   0.209
Authors: A.Camara-Artigas
Key ref: A.Camara-Artigas Crystal structure of the abl-Sh3 domain complexed wit designed high-Affinity peptide ligand p7. To be published, .
Date:
16-Feb-13     Release date:   29-Jan-14    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
P00519  (ABL1_HUMAN) -  Tyrosine-protein kinase ABL1 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1130 a.a.
59 a.a.
Protein chains
Pfam   ArchSchema ?
P00519  (ABL1_HUMAN) -  Tyrosine-protein kinase ABL1 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1130 a.a.
56 a.a.
Protein chains
No UniProt id for this chain
Struc: 10 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: Chains A, B, C, D, E, F: E.C.2.7.10.2  - non-specific protein-tyrosine kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H+
L-tyrosyl-[protein]
+ ATP
= O-phospho-L-tyrosyl-[protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

spacer

spacer