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PDBsum entry 4cty

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protein ligands metals Protein-protein interface(s) links
Oxidoreductase PDB id
4cty

 

 

 

 

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Contents
Protein chains
404 a.a.
Ligands
HEM ×2
H4B ×2
S5D ×2
ACT ×2
GOL ×3
Metals
_ZN
Waters ×333
PDB id:
4cty
Name: Oxidoreductase
Title: Structure of bovine endothelial nitric oxide synthase heme domain in complex with (r)-6-(2-amino-2-(3-(2-(6-amino-4-methylpyridin-2-yl) ethyl)phenyl)ethyl)-4-methylpyridin-2-amine
Structure: Nitric oxide synthase, endothelial. Chain: a, b. Fragment: heme domain, residues 40-482. Synonym: constitutive nos, cnos, ec-nos, endothelial nos, enos, nos type iii, nosiii. Engineered: yes
Source: Bos taurus. Cattle. Organism_taxid: 9913. Expressed in: escherichia coli. Expression_system_taxid: 469008.
Resolution:
2.30Å     R-factor:   0.164     R-free:   0.219
Authors: G.Chreifi,H.Li,T.L.Poulos
Key ref: S.Kang et al. (2014). Nitric oxide synthase inhibitors that interact with both heme propionate and tetrahydrobiopterin show high isoform selectivity. J Med Chem, 57, 4382-4396. PubMed id: 24758147 DOI: 10.1021/jm5004182
Date:
15-Mar-14     Release date:   07-May-14    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
P29473  (NOS3_BOVIN) -  Nitric oxide synthase 3 from Bos taurus
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1205 a.a.
404 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 2 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class: E.C.1.14.13.39  - nitric-oxide synthase (NADPH).
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: 2 L-arginine + 3 NADPH + 4 O2 + H+ = 2 L-citrulline + 2 nitric oxide + 3 NADP+ + 4 H2O
2 × L-arginine
+ 3 × NADPH
+ 4 × O2
+ H(+)
= 2 × L-citrulline
+ 2 × nitric oxide
+ 3 × NADP(+)
+ 4 × H2O
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    reference    
 
 
DOI no: 10.1021/jm5004182 J Med Chem 57:4382-4396 (2014)
PubMed id: 24758147  
 
 
Nitric oxide synthase inhibitors that interact with both heme propionate and tetrahydrobiopterin show high isoform selectivity.
S.Kang, W.Tang, H.Li, G.Chreifi, P.Martásek, L.J.Roman, T.L.Poulos, R.B.Silverman.
 
  ABSTRACT  
 
Overproduction of NO by nNOS is implicated in the pathogenesis of diverse neuronal disorders. Since NO signaling is involved in diverse physiological functions, selective inhibition of nNOS over other isoforms is essential to minimize side effects. A series of α-amino functionalized aminopyridine derivatives (3-8) were designed to probe the structure-activity relationship between ligand, heme propionate, and H4B. Compound 8R was identified as the most potent and selective molecule of this study, exhibiting a Ki of 24 nM for nNOS, with 273-fold and 2822-fold selectivity against iNOS and eNOS, respectively. Although crystal structures of 8R complexed with nNOS and eNOS revealed a similar binding mode, the selectivity stems from the distinct electrostatic environments in two isoforms that result in much lower inhibitor binding free energy in nNOS than in eNOS. These findings provide a basis for further development of simple, but even more selective and potent, nNOS inhibitors.
 

 

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