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PDBsum entry 4bpy

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Chaperone PDB id
4bpy

 

 

 

 

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Contents
Protein chain
163 a.a.
Waters ×121
PDB id:
4bpy
Name: Chaperone
Title: Crystal structure of the c90a mutant of the sco copper chaperone protein from streptomyces lividans
Structure: Sco protein. Chain: a. Engineered: yes. Mutation: yes
Source: Streptomyces lividans. Organism_taxid: 1916. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
1.40Å     R-factor:   0.134     R-free:   0.185
Authors: K.L.I.M.Blundell,M.A.Hough,J.A.R.Worrall
Key ref: K.L.Blundell et al. (2014). Structural and mechanistic insights into an extracytoplasmic copper trafficking pathway in Streptomyces lividans. Biochem J, 459, 525-538. PubMed id: 24548299 DOI: 10.1042/BJ20140017
Date:
29-May-13     Release date:   05-Mar-14    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q93J40  (Q93J40_STRCO) -  Secreted protein from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Seq:
Struc:
216 a.a.
163 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 2 residue positions (black crosses)

 

 
DOI no: 10.1042/BJ20140017 Biochem J 459:525-538 (2014)
PubMed id: 24548299  
 
 
Structural and mechanistic insights into an extracytoplasmic copper trafficking pathway in Streptomyces lividans.
K.L.Blundell, M.A.Hough, E.Vijgenboom, J.A.Worrall.
 
  ABSTRACT  
 
In Streptomyces lividans an extracytoplasmic copper-binding Sco protein plays a role in two unlinked processes: (i) initiating a morphological development switch and (ii) facilitating the co-factoring of the CuA domain of CcO (cytochrome c oxidase). How Sco obtains copper once secreted to the extracytoplasmic environment is unknown. In the present paper we report on a protein possessing an HX6MX21HXM motif that binds a single cuprous ion with subfemtomolar affinity. High-resolution X-ray structures of this extracytoplasmic copper chaperone-like protein (ECuC) in the apo- and Cu(I)-bound states reveal that the latter possesses a surface-accessible cuprous-ion-binding site located in a dish-shaped region of β-sheet structure. A cuprous ion is transferred under a favourable thermodynamic gradient from ECuC to Sco with no back transfer occurring. The ionization properties of the cysteine residues in the Cys86xxxCys90 copper-binding motif of Sco, together with their positional locations identified from an X-ray structure of Sco, suggests a role for Cys86 in initiating an inter-complex ligand-exchange reaction with Cu(I)-ECuC. Generation of the genetic knockouts, Δsco, Δecuc and Δsco/ecuc, and subsequent in vivo assays lend support to the existence of a branched extracytoplasmic copper-trafficking pathway in S. lividans. One branch requires both Sco and to a certain extent ECuC to cofactor the CuA domain, whereas the other uses only Sco to deliver copper to a cuproenzyme to initiate morphological development.
 

 

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