PDBsum entry 4udp

Oxidoreductase

PDB id

4udp

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Contents

			Protein chains

					520 a.a.

			Ligands

					FAD ×2

			Waters ×344

PDB id:

4udp

Links

Name:

Oxidoreductase

Title:

Crystal structure of 5-hydroxymethylfurfural oxidase (hmfo) in the oxidized state

Structure:

Glucose-methanol-choline oxidoreductase. Chain: a, b. Synonym: 5- hydroxymethylfurfural oxidase. Engineered: yes. Mutation: yes

Source:

Methylovorus sp. Mp688. Organism_taxid: 887061. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008

Resolution:

1.90Å

R-factor:

0.181

R-free:

0.236

Authors:

W.Dijkman,C.Binda,M.Fraaije,A.Mattevi

Key ref:

W.P.Dijkman et al. (2015). Structure-Based enzyme tailoring of 5-Hydroxymethylfu oxidase. Acs catalysis, 5, 1833.

Date:

11-Dec-14

Release date:

18-Mar-15

PROCHECK

	Headers

	References

Protein chains

E4QP00 (HMFO_METS6) - 5-(hydroxymethyl)furfural oxidase from Methylovorus sp. (strain MP688)

Seq: Struc:

Seq: Struc:					531 a.a. 520 a.a.

Key:

PfamA domain

Secondary structure

CATH domain



		Enzyme reactions

Enzyme class 2:

E.C.1.1.3.47 - 5-(hydroxymethyl)furfural oxidase.

[IntEnz] [ExPASy] [KEGG] [BRENDA]

Reaction:

5-hydroxymethylfurfural + 3 O2 + 2 H2O = 2,5-dicarboxyfuran + 3 H2O2 + 2 H⁺

5-hydroxymethylfurfural	+	3 × O2	+	2 × H2O	=	2,5-dicarboxyfuran	+	3 × H2O2	+	2 × H(+)

Enzyme class 3:

E.C.1.8.3.- - ?????

[IntEnz] [ExPASy] [KEGG] [BRENDA]

Note, where more than one E.C. class is given (as above), each may correspond to a different protein domain or, in the case of polyprotein precursors, to a different mature protein.

Molecule diagrams generated from .mol files obtained from the KEGG ftp site