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PDBsum entry 4imt

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protein ligands metals Protein-protein interface(s) links
Oxidoreductase/oxidoreductase inhibitor PDB id
4imt

 

 

 

 

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Contents
Protein chains
407 a.a.
Ligands
HEM ×2
H4B ×2
1EW ×2
ACT ×2
Metals
_ZN
Waters ×162
PDB id:
4imt
Name: Oxidoreductase/oxidoreductase inhibitor
Title: Structure of rat neuronal nitric oxide synthase in complex with 6,6'- ((4-(3-aminopropyl)-1,3-phenylene)bis(ethane-2,1-diyl))bis(4- methylpyridin-2-amine)
Structure: Nitric oxide synthase, brain. Chain: a, b. Fragment: unp residues 297-718. Synonym: bnos, constitutive nos, nc-nos, nos type i, neuronal nos, n- nos, nnos, peptidyl-cysteine s-nitrosylase nos1. Engineered: yes
Source: Rattus norvegicus. Rat. Organism_taxid: 10116. Gene: nos1, bnos. Expressed in: escherichia coli. Expression_system_taxid: 469008.
Resolution:
2.20Å     R-factor:   0.201     R-free:   0.248
Authors: H.Li,T.L.Poulos
Key ref: H.Huang et al. (2013). Structure-guided design of selective inhibitors of neuronal nitric oxide synthase. J Med Chem, 56, 3024-3032. PubMed id: 23451760 DOI: 10.1021/jm4000984
Date:
03-Jan-13     Release date:   24-Apr-13    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
P29476  (NOS1_RAT) -  Nitric oxide synthase 1 from Rattus norvegicus
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1429 a.a.
407 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.1.14.13.39  - nitric-oxide synthase (NADPH).
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: 2 L-arginine + 3 NADPH + 4 O2 + H+ = 2 L-citrulline + 2 nitric oxide + 3 NADP+ + 4 H2O
2 × L-arginine
+ 3 × NADPH
+ 4 × O2
+ H(+)
= 2 × L-citrulline
+ 2 × nitric oxide
+ 3 × NADP(+)
+ 4 × H2O
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    reference    
 
 
DOI no: 10.1021/jm4000984 J Med Chem 56:3024-3032 (2013)
PubMed id: 23451760  
 
 
Structure-guided design of selective inhibitors of neuronal nitric oxide synthase.
H.Huang, H.Li, P.Martásek, L.J.Roman, T.L.Poulos, R.B.Silverman.
 
  ABSTRACT  
 
Nitric oxide synthases (NOSs) comprise three closely related isoforms that catalyze the oxidation of l-arginine to l-citrulline and the important second messenger nitric oxide (NO). Pharmacological selective inhibition of neuronal NOS (nNOS) has the potential to be therapeutically beneficial in various neurodegenerative diseases. Here, we present a structure-guided, selective nNOS inhibitor design based on the crystal structure of lead compound 1 in nNOS. The best inhibitor, 7, exhibited low nanomolar inhibitory potency and good isoform selectivities (nNOS over eNOS and iNOS are 472-fold and 239-fold, respectively). Consistent with the good selectivity, 7 binds to nNOS and eNOS with different binding modes. The distinctly different binding modes of 7, driven by the critical residue Asp597 in nNOS, offers compelling insight to explain its isozyme selectivity, which should guide future drug design programs.
 

 

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