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PDBsum entry 4dq1

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protein ligands Protein-protein interface(s) links
Transferase PDB id
4dq1

 

 

 

 

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JSmol PyMol  
Contents
Protein chains
312 a.a.
Ligands
UMP ×2
Waters ×26
PDB id:
4dq1
Name: Transferase
Title: Thymidylate synthase from staphylococcus aureus.
Structure: Thymidylate synthase. Chain: a, b. Synonym: ts, tsase. Engineered: yes
Source: Staphylococcus aureus. Organism_taxid: 158878. Strain: subsp. Aureus mu50. Gene: sav1427, thya. Expressed in: escherichia coli. Expression_system_taxid: 562.
Resolution:
2.71Å     R-factor:   0.195     R-free:   0.252
Authors: J.Osipiuk,J.Holowicki,R.Jedrzejczak,E.Rubin,K.Guinn,T.Ioerger, D.Baker,J.Sacchettini,A.Joachimiak,Midwest Center For Structural Genomics (Mcsg),Structures Of Mtb Proteins Conferring Susceptibility To Known Mtb Inhibitors (Mtbi)
Key ref: J.Osipiuk et al. Thymidylate synthase from staphylococcus aureus.. To be published, .
Date:
14-Feb-12     Release date:   21-Mar-12    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
P67046  (TYSY_STAAM) -  Thymidylate synthase from Staphylococcus aureus (strain Mu50 / ATCC 700699)
Seq:
Struc:
318 a.a.
312 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.1.1.45  - thymidylate synthase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

      Pathway:
Folate Coenzymes
      Reaction: dUMP + (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate = 7,8-dihydrofolate + dTMP
dUMP
+ (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate
Bound ligand (Het Group name = UMP)
corresponds exactly
= 7,8-dihydrofolate
+ dTMP
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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