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PDBsum entry 4dam
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protein Protein-protein interface(s) links
DNA binding protein PDB id
4dam

 

 

 

 

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Contents
Protein chains
(+ 3 more) 113 a.a.
100 a.a.
98 a.a.
100 a.a.
Waters ×808
PDB id:
4dam
Name: DNA binding protein
Title: Crystal structure of small single-stranded DNA-binding protein from streptomyces coelicolor
Structure: Single-stranded DNA-binding protein 1. Chain: a, b, c, d, e, f, g, h, i, j, k, l. Fragment: unp residues 1-116. Synonym: ssb 1, helix-destabilizing protein 1. Engineered: yes. Mutation: yes
Source: Streptomyces coelicolor. Organism_taxid: 1902. Strain: m145. Gene: scc61a.04c, sco2683, ssb1. Expressed in: escherichia coli. Expression_system_taxid: 562.
Resolution:
1.70Å     R-factor:   0.155     R-free:   0.192
Authors: Z.Filic,P.Herron,N.Ivic,M.Luic,B.A.Manjasetty,T.Paradzik,D.Vujaklija
Key ref: T.Paradzik et al. (2013). Structure-function relationships of two paralogous single-stranded DNA-binding proteins from Streptomyces coelicolor: implication of SsbB in chromosome segregation during sporulation. Nucleic Acids Res, 41, 3659-3672. PubMed id: 23393191 DOI: 10.1093/nar/gkt050
Date:
13-Jan-12     Release date:   16-Jan-13    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q9KYI9  (SSB1_STRCO) -  Single-stranded DNA-binding protein 1 from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Seq:
Struc: 		156 a.a.
113 a.a.*
Protein chain
Pfam   ArchSchema ?
Q9KYI9  (SSB1_STRCO) -  Single-stranded DNA-binding protein 1 from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Seq:
Struc: 		156 a.a.
100 a.a.*
Protein chain
Pfam   ArchSchema ?
Q9KYI9  (SSB1_STRCO) -  Single-stranded DNA-binding protein 1 from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Seq:
Struc: 		156 a.a.
98 a.a.*
Protein chain
Pfam   ArchSchema ?
Q9KYI9  (SSB1_STRCO) -  Single-stranded DNA-binding protein 1 from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Seq:
Struc: 		156 a.a.
100 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 4 residue positions (black crosses)

 

 
DOI no: 10.1093/nar/gkt050 Nucleic Acids Res 41:3659-3672 (2013)
PubMed id: 23393191  
 
 
Structure-function relationships of two paralogous single-stranded DNA-binding proteins from Streptomyces coelicolor: implication of SsbB in chromosome segregation during sporulation.
T.Paradzik, N.Ivic, Z.Filic, B.A.Manjasetty, P.Herron, M.Luic, D.Vujaklija.
 
  ABSTRACT  
 
No abstract given.

 

 

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