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PDBsum entry 3zcs

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protein ligands links
Transferase PDB id
3zcs

 

 

 

 

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JSmol PyMol  
Contents
Protein chain
807 a.a.
Ligands
PLP
IMP
CAW
Waters ×275
PDB id:
3zcs
Name: Transferase
Title: Rabbit muscle glycogen phosphorylase b in complex with n-(1-naphthoyl) -n-beta-d-glucopyranosyl urea determined at 2.07 a resolution
Structure: Glycogen phosphorylase, muscle form. Chain: a. Synonym: myophosphorylase. Mutation: yes
Source: Oryctolagus cuniculus. Rabbit. Organism_taxid: 9986. Tissue: skeletal muscle
Resolution:
2.03Å     R-factor:   0.193     R-free:   0.217
Authors: E.D.Chrysina,V.Nagy,N.Felfoldi,B.Konya,K.Telepo,J.P.Praly,T.Docsa, P.Gergely,K.M.Alexacou,J.M.Hayes,M.Konstantakaki,R.Kardakaris, D.D.Leonidas,S.E.Zographos,N.G.Oikonomakos,L.Somsak
Date:
21-Nov-12     Release date:   11-Dec-13    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P00489  (PYGM_RABIT) -  Glycogen phosphorylase, muscle form from Oryctolagus cuniculus
Seq:
Struc:
 
Seq:
Struc:
843 a.a.
807 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class: E.C.2.4.1.1  - glycogen phosphorylase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

      Pathway:
Glycogen
      Reaction: [(1->4)-alpha-D-glucosyl](n) + phosphate = [(1->4)-alpha-D-glucosyl](n-1) + alpha-D-glucose 1-phosphate
[(1->4)-alpha-D-glucosyl](n)
+ phosphate
= [(1->4)-alpha-D-glucosyl](n-1)
+
alpha-D-glucose 1-phosphate
Bound ligand (Het Group name = IMP)
matches with 50.00% similarity
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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