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PDBsum entry 3vmf

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protein ligands metals Protein-protein interface(s) links
Translation PDB id
3vmf

 

 

 

 

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JSmol PyMol  
Contents
Protein chains
427 a.a.
351 a.a.
Ligands
GTP
SO4
Metals
_MG
Waters ×162
PDB id:
3vmf
Name: Translation
Title: Archaeal protein
Structure: Elongation factor 1-alpha. Chain: a. Synonym: ef-1-alpha, elongation factor tu, ef-tu. Engineered: yes. Peptide chain release factor subunit 1. Chain: b. Synonym: translation termination factor arf1. Engineered: yes
Source: Aeropyrum pernix. Organism_taxid: 272557. Strain: k1. Gene: tuf, ape_1844. Expressed in: escherichia coli. Expression_system_taxid: 562. Gene: prf1, ape_1988.1.
Resolution:
2.30Å     R-factor:   0.204     R-free:   0.261
Authors: K.Kobayashi,K.Saito,R.Ishitani,K.Ito,O.Nureki
Key ref: K.Kobayashi et al. (2012). Structural basis for translation termination by archaeal RF1 and GTP-bound EF1α complex. Nucleic Acids Res, 40, 9319-9328. PubMed id: 22772989
Date:
12-Dec-11     Release date:   25-Jul-12    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q9YAV0  (EF1A_AERPE) -  Elongation factor 1-alpha from Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
Seq:
Struc:
437 a.a.
427 a.a.
Protein chain
Pfam   ArchSchema ?
Q9YAF1  (RF1_AERPE) -  Peptide chain release factor subunit 1 from Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
Seq:
Struc:
373 a.a.
351 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 

 
Nucleic Acids Res 40:9319-9328 (2012)
PubMed id: 22772989  
 
 
Structural basis for translation termination by archaeal RF1 and GTP-bound EF1α complex.
K.Kobayashi, K.Saito, R.Ishitani, K.Ito, O.Nureki.
 
  ABSTRACT  
 
No abstract given.

 

 

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