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PDBsum entry 3vfc

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protein ligands links
Lyase PDB id
3vfc

 

 

 

 

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JSmol PyMol  
Contents
Protein chain
417 a.a.
Ligands
TLA
DTT
_CL
Waters ×293
PDB id:
3vfc
Name: Lyase
Title: Crystal structure of enolase msmeg_6132 (target efi-502282) from mycobacterium smegmatis str. Mc2 155 complexed with tartrate
Structure: Probable glucarate dehydratase. Chain: a. Engineered: yes
Source: Mycobacterium smegmatis str. Mc2 155. Organism_taxid: 246196. Strain: atcc 700084 / mc(2)155. Gene: msmeg_6132. Expressed in: escherichia coli. Expression_system_taxid: 469008.
Resolution:
2.00Å     R-factor:   0.161     R-free:   0.192
Authors: Y.Patskovsky,R.Toro,R.Bhosle,B.Hillerich,R.D.Seidel,E.Washington, A.Scott Glenn,S.Chowdhury,B.Evans,J.Hammonds,W.D.Zencheck,H.J.Imker, J.A.Gerlt,S.C.Almo,Enzyme Function Initiative (Efi)
Key ref: Y.Patskovsky et al. Crystal structure of enolase msmeg_6132 from mycobact smegmatis. To be published, .
Date:
09-Jan-12     Release date:   25-Jan-12    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
A0R5B5  (A0R5B5_MYCS2) -  glucarate dehydratase from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
Seq:
Struc:
423 a.a.
418 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.4.2.1.40  - glucarate dehydratase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: D-glucarate = 5-dehydro-4-deoxy-D-glucarate + H2O
D-glucarate
Bound ligand (Het Group name = TLA)
matches with 60.00% similarity
= 5-dehydro-4-deoxy-D-glucarate
+ H2O
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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