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PDBsum entry 3v4z
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PDB id:
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Ligase
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Title:
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D-alanine--d-alanine ligase from yersinia pestis
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Structure:
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D-alanine--d-alanine ligase. Chain: a, b. Synonym: d-ala-d-ala ligase, d-alanylalanine synthetase. Engineered: yes
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Source:
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Yersinia pestis. Organism_taxid: 214092. Strain: co92. Gene: ddl, ddlb, y3624, ypo0557, yp_3627. Expressed in: escherichia coli. Expression_system_taxid: 562.
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Resolution:
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2.69Å
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R-factor:
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0.209
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R-free:
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0.289
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Authors:
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J.Osipiuk,B.Nocek,R.Mulligan,L.Papazisi,W.F.Anderson,A.Joachimiak, Center For Structural Genomics Of Infectious Diseases (Csgid)
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Key ref:
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J.Osipiuk
et al.
D-Alanine--D-Alanine ligase from yersinia pestis..
To be published,
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Date:
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15-Dec-11
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Release date:
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28-Dec-11
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PROCHECK
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Headers
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References
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Q8ZIE7
(DDL_YERPE) -
D-alanine--D-alanine ligase from Yersinia pestis
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Seq:
Struc:
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306 a.a.
293 a.a.
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Key: |
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PfamA domain |
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Secondary structure |
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CATH domain |
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Enzyme class:
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E.C.6.3.2.4
- D-alanine--D-alanine ligase.
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Pathway:
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Peptidoglycan Biosynthesis (Part 1)
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Reaction:
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2 D-alanine + ATP = D-alanyl-D-alanine + ADP + phosphate + H+
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2
×
D-alanine
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+
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ATP
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=
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D-alanyl-D-alanine
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+
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ADP
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+
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phosphate
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+
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H(+)
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Molecule diagrams generated from .mol files obtained from the
KEGG ftp site
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Links
