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PDBsum entry 3twb
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PDB id:
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Lyase
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Title:
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Crystal structure of gluconate dehydratase (target efi-501679) from salmonella enterica subsp. Enterica serovar enteritidis str. P125109 complexed with magnesium and gluconic acid
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Structure:
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Putative dehydratase. Chain: a, b, c, d, e. Engineered: yes
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Source:
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Salmonella enterica subsp. Enterica serovar enteritidis. Organism_taxid: 550537. Strain: p125109. Gene: sen1436. Expressed in: escherichia coli. Expression_system_taxid: 469008.
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Resolution:
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1.76Å
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R-factor:
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0.171
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R-free:
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0.206
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Authors:
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Y.Patskovsky,R.Toro,R.Bhosle,B.Hillerich,R.D.Seidel,E.Washington, A.Scott Glenn,S.Chowdhury,B.Evans,J.Hammonds,W.D.Zencheck,H.J.Imker, J.A.Gerlt,S.C.Almo,Enzyme Function Initiative (Efi)
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Key ref:
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Y.Patskovsky
et al.
Crystal structure of gluconate dehydratase from salmo enterica p125109.
To be published,
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Date:
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21-Sep-11
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Release date:
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26-Oct-11
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PROCHECK
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Headers
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References
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B5R541
(DGD_SALEP) -
D-galactonate dehydratase family member SEN1436 from Salmonella enteritidis PT4 (strain P125109)
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Seq:
Struc:
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419 a.a.
415 a.a.
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Key: |
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PfamA domain |
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Secondary structure |
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CATH domain |
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Enzyme class:
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E.C.4.2.1.39
- gluconate dehydratase.
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Reaction:
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D-gluconate = 2-dehydro-3-deoxy-D-gluconate + H2O
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D-gluconate
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=
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2-dehydro-3-deoxy-D-gluconate
Bound ligand (Het Group name = )
matches with 92.31% similarity
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+
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H2O
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Molecule diagrams generated from .mol files obtained from the
KEGG ftp site
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Links
