spacer
spacer

PDBsum entry 3ozu

Go to PDB code: 
protein ligands links
Lipid binding protein PDB id
3ozu

 

 

 

 

Loading ...

 
JSmol PyMol  
Contents
Protein chain
403 a.a.
Ligands
HEM
FAD
X89
PO4
Waters ×336
PDB id:
3ozu
Name: Lipid binding protein
Title: The crystal structure of flavohemoglobin from r. Eutrophus in complex with miconazole
Structure: Flavohemoprotein. Chain: a. Synonym: hemoglobin-like protein, flavohemoglobin, fhp, nitric oxide dioxygenase, no oxygenase, nod. Engineered: yes
Source: Ralstonia eutropha. Cupriavidus necator. Organism_taxid: 381666. Strain: h16. Gene: hmp, fhp, phg200. Expressed in: escherichia coli. Expression_system_taxid: 511693.
Resolution:
2.00Å     R-factor:   0.188     R-free:   0.233
Authors: E.El Hammi,E.Warkentin,U.Demmer,U.Ermler,L.Baciou
Key ref: E.El Hammi et al. (2011). Structure of Ralstonia eutropha flavohemoglobin in complex with three antibiotic azole compounds. Biochemistry, 50, 1255-1264. PubMed id: 21210640
Date:
27-Sep-10     Release date:   16-Mar-11    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P39662  (HMP_CUPNH) -  Flavohemoprotein from Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
Seq:
Struc:
403 a.a.
403 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.1.14.12.17  - nitric oxide dioxygenase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction:
1. 2 nitric oxide + NADPH + 2 O2 = 2 nitrate + NADP+ + H+
2. 2 nitric oxide + NADH + 2 O2 = 2 nitrate + NAD+ + H+
2 × nitric oxide
+ NADPH
+ 2 × O2
= 2 × nitrate
+ NADP(+)
+ H(+)
2 × nitric oxide
+ NADH
+ 2 × O2
= 2 × nitrate
+ NAD(+)
+ H(+)
      Cofactor: FAD; Heme
FAD
Bound ligand (Het Group name = FAD) corresponds exactly
Heme
Bound ligand (Het Group name = HEM) matches with 95.45% similarity
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    reference    
 
 
Biochemistry 50:1255-1264 (2011)
PubMed id: 21210640  
 
 
Structure of Ralstonia eutropha flavohemoglobin in complex with three antibiotic azole compounds.
E.El Hammi, E.Warkentin, U.Demmer, F.Limam, N.M.Marzouki, U.Ermler, L.Baciou.
 
  ABSTRACT  
 
No abstract given.

 

 

spacer

spacer