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PDBsum entry 3odf

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protein ligands metals links
Hydrolase PDB id
3odf

 

 

 

 

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Contents
Protein chain
240 a.a. *
Ligands
SO4 ×2
Metals
_NA
Waters ×526
* Residue conservation analysis
PDB id:
3odf
Name: Hydrolase
Title: Comparison of the character and the speed of x-ray-induced structural changes of porcine pancreatic elastase at two temperatures, 100 and 15k. The data set was collected from region a of the crystal. Second step of radiation damage
Structure: Chymotrypsin-like elastase family member 1. Chain: a. Synonym: elastase-1. Ec: 3.4.21.36
Source: Sus scrofa. Pigs,swine,wild boar. Organism_taxid: 9823
Resolution:
1.10Å     R-factor:   0.124     R-free:   0.147
Authors: T.Petrova,S.Ginell,A.Mitschler,A.Cousido-Siah,I.Hazemann,A.Podjarny, A.Joachimiak
Key ref: T.Petrova et al. (2010). X-ray-induced deterioration of disulfide bridges at atomic resolution. Acta Crystallogr D Biol Crystallogr, 66, 1075-1091. PubMed id: 20944241
Date:
11-Aug-10     Release date:   25-Aug-10    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
P00772  (CELA1_PIG) -  Chymotrypsin-like elastase family member 1 from Sus scrofa
Seq:
Struc:
266 a.a.
240 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class: E.C.3.4.21.36  - pancreatic elastase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: Hydrolysis of proteins, including elastin. Preferential cleavage: Ala-|-Xaa.

 

 
Acta Crystallogr D Biol Crystallogr 66:1075-1091 (2010)
PubMed id: 20944241  
 
 
X-ray-induced deterioration of disulfide bridges at atomic resolution.
T.Petrova, S.Ginell, A.Mitschler, Y.Kim, V.Y.Lunin, G.Joachimiak, A.Cousido-Siah, I.Hazemann, A.Podjarny, K.Lazarski, A.Joachimiak.
 
  ABSTRACT  
 
No abstract given.

 

Literature references that cite this PDB file's key reference

  PubMed id Reference
21525640 D.H.Juers, and M.Weik (2011).
Similarities and differences in radiation damage at 100 K versus 160 K in a crystal of thermolysin.
  J Synchrotron Radiat, 18, 329-337.  
21525638 E.F.Garman, and M.Weik (2011).
Macromolecular crystallography radiation damage research: what's new?
  J Synchrotron Radiat, 18, 313-317.  
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time.

 

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