 |
PDBsum entry 3ld8
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Immune system
|
PDB id
|
|
|
|
3ld8
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Contents |
 |
|
|
|
|
|
|
|
|
|
334 a.a.
|
 |
|
|
|
|
|
|
|
217 a.a.
|
 |
|
|
|
|
|
|
|
210 a.a.
|
 |
|
|
|
|
|
|
|
|
* Residue conservation analysis
|
|
|
|
|
PDB id:
|
 |
|
 |
| Name: |
 |
Immune system
|
 |
|
Title:
|
 |
Structure of jmjd6 and fab fragments
|
|
Structure:
|
 |
Bifunctional arginine demethylase and lysyl-hydroxylase jmjd6. Chain: a. Synonym: histone arginine demethylase jmjd6, peptide-lysine 5- dioxygenase jmjd6, lysyl-hydroxylase jmjd6, jmjc domain-containing protein 6, jumonji domain-containing protein 6, phosphatidylserine receptor, protein ptdsr. Engineered: yes. Antibody fab fragment light chain.
|
|
Source:
|
 |
Homo sapiens. Human. Organism_taxid: 9606. Gene: jmjd6, jmjd6(1-403), kiaa0585, ptdsr. Expressed in: escherichia coli. Expression_system_taxid: 562. Cricetulus migratorius. Organism_taxid: 10032. Cell: hybridoma.
|
|
Resolution:
|
 |
|
2.70Å
|
R-factor:
|
0.233
|
R-free:
|
0.260
|
|
|
Authors:
|
 |
X.Hong,J.Zang,J.White,J.W.Kappler,C.Wang,G.Zhang
|
|
Key ref:
|
 |
X.Hong
et al.
(2010).
Interaction of JMJD6 with single-stranded RNA.
Proc Natl Acad Sci U S A,
107,
14568-14572.
PubMed id:
|
 |
|
Date:
|
 |
|
12-Jan-10
|
Release date:
|
04-Aug-10
|
|
|
|
|
|
PROCHECK
|
|
|
|
|
Headers
|
 |
|
|
References
|
|
|
|
|
|
|
Q6NYC1
(JMJD6_HUMAN) -
Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 from Homo sapiens
|
|
|
|
Seq: Struc:
|
 |
 |
 |
403 a.a.
334 a.a.
|
|
|
|
|
|
|
|
|
 |
 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
| |
|
|
Proc Natl Acad Sci U S A
107:14568-14572
(2010)
|
|
PubMed id:
|
|
|
|
|
| |
|
Interaction of JMJD6 with single-stranded RNA.
|
|
X.Hong,
J.Zang,
J.White,
C.Wang,
C.H.Pan,
R.Zhao,
R.C.Murphy,
S.Dai,
P.Henson,
J.W.Kappler,
J.Hagman,
G.Zhang.
|
|
|
|
| |
ABSTRACT
|
|
|
| |
|
|
|
|
|
 |
 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
Literature references that cite this PDB file's key reference
|
|
 |
| |
PubMed id
|
 |
Reference
|
 |
|
|
|
 |
Y.Yang,
and
M.T.Bedford
(2013).
Protein arginine methyltransferases and cancer.
|
| |
Nat Rev Cancer,
13,
37-50.
|
 |
|
 |
 |
|
The most recent references are shown first.
Citation data come partly from CiteXplore and partly
from an automated harvesting procedure. Note that this is likely to be
only a partial list as not all journals are covered by
either method. However, we are continually building up the citation data
so more and more references will be included with time.
|
');
}
}
 |
| |